Skip to main content
. Author manuscript; available in PMC: 2019 Aug 1.
Published in final edited form as: Neuroimage. 2018 May 4;176:431–445. doi: 10.1016/j.neuroimage.2018.04.073

Table 1.

p-values for all datasets, computed by the signed-rank test. We perform a one-tailed paired Wilcoxon signed-rank test, where the null-hypothesis (0) is that the paired differences for the results of our PCA model and of the compared method come from a distribution with zero median, against the alternative (1)that the paired differences have a non-zero median (greater than zero for Dice, sensitivity and specificity, and less than zero for surface distances). In addition, we use the Benjamini-Hochberg procedure to reduce the false discovery rate (FDR). We highlight, in green, the results where our PCA model performs statistically significantly better. The results show that our PCA model outperforms other methods on most of the measures.

Dataset: IBSR
ROBEX BEaST* MASS BET BSE CNN
Dice 4.78e-5 1.20e-2 2.77e-4 4.78e-5 7.55e-5 4.78e-5
Avg Dist 4.78e-5 2.73e-2 1.82e-4 4.78e-5 4.78e-5 4.78e-5
95% Dist 4.74e-5 5.91e-2 1.05e-4 4.71e-5 4.74e-5 4.78e-5
Max Dist 4.78e-5 5.36e-2 4.78e-5 4.78e-5 1.58e-4 5.58e-5
Sensitivity 0.994 0.448 3.40e-3 0.829 4.78e-5 4.78e-5
Specificity 5.58e-5 2.97e-2 2.41e-3 4.78e-5 0.894 1.000
Dataset: LPBA40
ROBEX BEaST MASS BET BSE CNN
Dice 1.47e-7 2.51e-8 1.89e-3 9.58e-5 2.24e-7 1.85e-8
Avg Dist 1.36e-7 2.51e-8 2.75e-3 1.60e-6 6.31e-7 1.85e-8
95% Dist 2.90e-8 3.29e-7 5.69e-2 2.71e-8 1.02e-5 1.85e-8
Max Dist 2.16e-8 1.000 2.58e-2 2.92e-8 3.01e-5 2.51e-8
Sensitivity 4.13e-3 1.27e-7 1.60e-6 1.000 6.14e-8 1.85e-8
Specificity 5.70e-6 0.998 1.000 2.00e-8 1.000 1.000
Dataset: BRATS
ROBEX BEaST* MASS BET BSE CNN
Dice 1.58e-4 3.18e-4 7.02e-2 4.78e-5 4.78e-5 4.78e-5
Avg Dist 1.36e-4 2.77e-4 9.89e-2 4.78e-5 4.78e-5 4.78e-5
95% Dist 8.41e-5 4.17e-4 0.266 1.53e-3 4.78e-5 7.15e-5
Max Dist 1.91e-2 7.38e-4 0.222 2.41e-4 1.18e-4 4.78e-5
Sensitivity 3.51e-2 0.981 2.09e-4 8.08e-2 5.58e-5 4.78e-5
Specificity 6.53e-2 1.82e-4 0.999 4.73e-3 0.999 1.000
Dataset: TBI
ROBEX BEaST MASS BET BSE CNN
Dice 3.91e-3 1.95e-2 2.73e-2 7.81e-3 3.91e-3 .91e-3
Avg Dist 3.91e-3 1.95e-2 3.91e-2 7.81e-3 3.91e-3 3.91e-3
95% Dist 3.91e-3 7.81e-3 7.81e-3 3.91e-3 3.91e-3 3.91e-3
Max Dist 1.17e-2 9.77e-2 0.344 5.47e-2 3.91e-3 3.91e-3
Sensitivity 0.980 3.91e-3 0.961 3.91e-3 3.91e-3 3.91e-3
Specificity 3.91e-3 1.000 2.73e-2 1.000 0.926 1.000