Table 4.
General guideline for gene expression assay for cancer clinical use
Assay | qRT-PCR | DNA microarray | nCounter | RNAseq | TMA&FISH |
---|---|---|---|---|---|
gene# | |||||
1-50 | ++ | + | |||
50-500 | ++ | ||||
500-2000 | ++ | ||||
>2000 | ++ | ||||
purposes | |||||
proteins | ++ | ||||
mRNAs | + | + | + | + | + |
novel discovery | ++ | ||||
facility | |||||
clinic lab | ++ | ||||
hospital lab | ++ | ||||
Institution core | + | + | ++ | ||
national lab | + | ++ | ++ | ||
use frequency | |||||
daily | ++ | ||||
weekly | + | + | |||
monthly | ++ | ++ | + |