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. Author manuscript; available in PMC: 2020 Mar 1.
Published in final edited form as: Addict Biol. 2018 Jan 9;24(2):275–289. doi: 10.1111/adb.12591

Table 1.

Glossary of terms

Term Definition/description
AUD Alcohol Use Disorder
ChIP-Seq Chromatin immunoprecipitation with sequencing
CNS Central nervous system
DHSs DNase I hypersensitive sites
DNase Deoxyribonuclease
eQTL Expression quantitative trait locus
GCTA Genomewide Complex Trait Analysis (Yang et al. 2011)
GWAS Genome-wide association study
H3K4me3 Trimethylation of lysine 4 on the histone H3 protein subunit regulatory mark
LD Linkage disequilibrium
LDScR Linkage Disequilibrium Score Regression (Bulik-Sullivan et al., 2015)
MAGMA Multi-marker Analysis of GenoMic Annotation (de Leeuw et al. 2015)
meQTL Methylation quantitative trait locus
mRNA Messenger RNA
NetWAS Network-wide association study
PLINK Statistical genetics software program (Purcell et al. 2007; Chang et al. 2015)
PPI Protein-protein interaction
RNA-Seq RNA sequencing
SNP Single-nucleotide polymorphism
TWAS Transcriptome-wide association studies (Gusev et al. 2016)
VEGAS Versatile gene-based association study (Liu et al. 2010; Mishra et al. 2015)