Table 1. Characterization of BPfu and BPja genomes in comparison with other published Blattabacterium strains.
Strain | BPfu | BPju | BNCIN | BGIGA | BBge | BPLAN | BBor | BPAA | BCpu | Bmda |
---|---|---|---|---|---|---|---|---|---|---|
Genome size (bp) | 645 082 | 636 644 | 626 627 | 632 588 | 640 335 | 640 442 | 638 184 | 632 490 | 609 561 | 590 554 |
Plasmids | 1 | 1 | 1 | 1 | 1 | 1 | 1 | * | 1 | 1 |
Plasmid size (bp) | 4127 | 3781 | 3675 | 3423 | 3485 | 3448 | 3735 | * | 3816 | 3306 |
Chromosome size (bp) | 640 955 | 632 863 | 622 952 | 629 165 | 636 850 | 636 994 | 634 449 | * | 605 745 | 587 248 |
G + C content (%) | 28.1/30.8 | 27.6/29.7 | 26.2/20.6 | 25.7/30.9 | 27.1/29.8 | 28.2/28.5 | 28.2/30.6 | 26.4/-* | 23.8/30.5 | 27.5/31.9 |
Total number of genes | 640 | 623 | 627 | 616 | 631 | 634 | 627 | 624 | 589 | 597 |
Total CDS | 590 + 6 | 572 + 6 | 581 + 5 | 573 + 4 | 586 + 4 | 587 + 4 | 572 + 7 | 575* | 545 + 3 | 544 + 4 |
rRNAs | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 |
tRNAs | 34 | 34 | 32 | 34 | 34 | 33 | 33 | 34 | 32 | 34 |
Other ncRNAs | 1 | 0 | 1 | 1 | 3 | 1 | 3 | 3 | 3 | 3 |
Pseudogenes | 6 | 8 | 5 | 1 | 1 | 6 | 9 | 9 | 3 | 9 |
Host species abbreviations and accession numbers: BPfu, Periplaneta fuliginosa; BPja, Periplaneta japonica; BNCIN, Nauphoeta cinereal (NC_022550.1); BGIGA, Blaberus giganteus (NC_017924.1); BBge, Blattella germanica (NC_013454.1); BPLAN, Periplaneta americana (NC_013418.2); BBor, Blatta orientalis (NC_020195.1); BPAA, Panesthia angustipennis (NC_020510.1); BCpu, Cryptocercus punctulatus (NC_016621.1); BMda, Mastotermes darwiniensis (NC_016146.1). The following features result from the analysis of both bacterial chromosome and plasmids (if present): genome size, number of base pairs, total number of genes, G+C content and total CDS. The asterisk (*) indicates no information given by the authors of the original study [16].