Table 1.
A. Genes at 1x Pressure | Fold change (HF/LF)a | B. Genes at 2x Pressure | Fold change (HF/LF)a |
---|---|---|---|
Collagens | Collagens | ||
Collagen 1α1 | 6.14 | Collagen 14α1 | 0.35 |
Collagen 6α2 | 2.09 | ||
Collagen 6α1 | 1.93 | ||
Collagen 4α2 | 1.76 | ||
Collagen 16α1 | 1.58 | ||
Collagen 15α1 | 0.28 | ||
ECM glycoproteins | ECM glycoproteins | ||
Thrombospondin 2 | 3.4 | Thrombospondin 2 | 1.85 |
SPARC | 1.97 | Tenascin C | 0.48 |
Laminin β1 | 1.78 | Laminin β1 | 0.42 |
Laminin ƴ1 | 0.62 | Laminin α1 | 0.41 |
Laminin α3 | 0.49 | Laminin β3 | 0.39 |
Osteopontin | 0.42 | ECM protein 1 | 0.31 |
Laminin β3 | 0.36 | Osteopontin | 0.20 |
ECM receptors/adhesion | ECM receptors/adhesion | ||
Vascular cell adhesion molecule 1 | 5.22 | Integrin αV | 3.95 |
Vascular cell adhesion molecule 1 | 2.17 | ||
Contactin 1 | 4.65 | CD44 | 0.46 |
Catenin α1 | 4.54 | Intercellular adhesion molecule 1 | 0.43 |
Catenin β1 | 2.49 | ||
Integrin β1 | 1.77 | ||
Neural cell adhesion molecule 1 | 1.59 | ||
Integrin β3 | 1.54 | ||
Integrin α7 | 1.50 | ||
Integrin β4 | 0.48 | ||
ECM regulators | ECM regulators | ||
Matrix metalloproteinase 12 | 3.53 | Matrix metalloproteinase 14 | 0.45 |
Matrix metalloproteinase 3 | 3.09 | Tissue inhibitor of metalloproteinases 1 | 0.39 |
Matrix metalloproteinase 1 | 3.07 | Matrix metalloproteinase 1 | 0.38 |
Tissue inhibitor of metalloproteinases 1 | 2.73 | Matrix metalloproteinase 11 | 0.37 |
Matrix metalloproteinase 2 | 2.39 | Tissue inhibitor of metalloproteinases 2 | 0.35 |
A disintegrin and metalloproteinase with thrombospondin motifs 8 | 0.52 | ||
Matrix metalloproteinase 16 | 0.44 |
Threshold fold-change differences semi-arbitrarily determined to be biologically significant were >1.5 and ≤ 0.5 as previously described (Vranka et al., 2015). SAM (significance analysis of microarrays), version 4.01 (Tusher et al., 2001), with 4 biological replicates, was used to determine statistically significant gene changes. The analysis was two class paired, with arrays median centered.