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. Author manuscript; available in PMC: 2018 Jul 10.
Published in final edited form as: Methods Enzymol. 2018 Feb 1;601:71–89. doi: 10.1016/bs.mie.2017.12.001

Table 1.

Typical HDR and mutEJ Frequencies

Treatment Donor HDR (%) mutEJ (%)
Nick SSO 0.05–0.2 0.01–0.1
siBRCA2 SSO 2–5 0.05–0.5
dsDNA plasmid 0.2–0.5 0.01–0.1
siBRCA2 dsDNA plasmid 0.010.1 0.3–0.8
DSB SSO 2–4 1–3
siBRCA2 SSO 2–4 1–3
dsDNA plasmid 1–3 1–3
siBRCA2 dsDNA plasmid 0.2–0.5 1–2

Frequencies were determined by scoring the fraction of GFP+ or mCherry+ cells among BFP+ cells in 293T TL reporter cells. As described in the text, the frequency of mutEJ is determined by a frame-shift assay, based on the fraction of mCherry+ cells, and the actual frequency of mutEJ is predicted to be at threefold higher than the value shown.