Table 2.
Gene | Residue position | 2007 (n = 21) | 2008 (n = 41) | 2009 (n = 22) | 2010 (n = 10) | 2012 (n = 13) | Total (n = 107) |
---|---|---|---|---|---|---|---|
Pfcrtc | C72S | – | – | – | – | – | – |
M74I | 100 | 100 | 100 | 100 | 100 | 100 | |
N75E | 100 | 100 | 100 | 100 | 100 | 100 | |
K76T | 100 | 100 | 100 | 100 | 100 | 100 | |
A220S | 100 | 100 | 100 | 100 | 100 | 100 | |
Pfmdr1 | N86Y | 4.8 | – | – | – | – | 0.9 |
Y184F | 28.6 | 43.9 | 31.8 | 10 | 7.7 | 30.8 | |
N1042D | 4.8 | – | 13.6 | – | – | 3.7 | |
Pfdhfr | N51I | 61.9 | 65.9 | 63.6 | 70 | 76.9 | 66.4 |
C59R | 95.2 | 100 | 100 | 100 | 100 | 99.1 | |
S108N | 95.2 | 100 | 100 | 100 | 100 | 99.1 | |
I164L | 71.4 | 85.4 | 77.2 | 80 | 61.5 | 77.5 | |
Pfdhps | S436A | 61.9 | 51.2 | 68.2 | 40 | 30.8 | 53.3 |
A437G | 95.2 | 95.1 | 95.4 | 100 | 100 | 96.3 | |
K540E/N | 90.5 | 85.4 | 90.9 | 100 | 61.5 | 86.0 | |
A581G | 23.8 | 46.3 | 36.4 | 40 | 69.2 | 42.1 | |
Pfmrp1 | H191Y | 66.7 | 75.6 | 63.6 | 30 | 84.6 | 68.2 |
N325S | 4.8 | 12.2 | 9.1 | 10 | 15.4 | 10.3 | |
S437A | 66.7 | 70.7 | 68.2 | 30 | 69.2 | 65.4 | |
H785N | 19.0 | 9.8 | 4.8 | 10 | 38.5 | 14.0 | |
I876V | 57.1 | 61 | 68.2 | 50 | 53.8 | 59.8 | |
T1007M | 19.0 | 22 | 31.8 | 20 | 46.2 | 26.2 | |
F1390I | 9.5 | 14.6 | 10 | – | 7.7 | 10.3 | |
PfK13c | NNb | 42.9 | 61.5 | 68.2 | 80 | 69.2 | 60.7 |
K189T | – | – | – | 10 | – | 1.0 | |
E252Q | 4.8 | 5.1 | – | – | – | 2.9 | |
P441L | 4.8 | – | – | – | – | 1.0 | |
F446I | 19.0 | 30.8 | 18.1 | 10 | 46.2 | 25.7 | |
R539T | – | 7.7 | – | – | 7.7 | 3.8 | |
P574L | 9.5 | 2.6 | – | – | – | 2.9 | |
C580Y | – | 2.6 | – | – | – | 1.0 | |
A676D | – | 5.1 | – | – | – | 2.9 | |
H719N | – | – | 18.1 | – | – | 3.8 |
ND, not done.
Significant differences in mutation prevalence are highlighted in bold (χ2 test): pfdhps S436A between 2009 and 2012 (P = 0.0358) and between 2010 and 2012 (P = 0.0266); pfdhps A581G 2007 and 2012 (P = 0.0089); pfmrp1 H191Y between 2008 and 2010 (P = 0.0061) and between 2010 and 2012 (P = 0.0078); pfmrp1 S437A between 2008 and 2010 (P = 0.0169) and between 2009 and 2010 (P = 0.0436); pfmrp1 H785N between 2008 and 2012 (P = 0.0155) and between 2009 and 2012 (P = 0.0101); PfK13 H719N between 2008 and 2009 (P = 0.0140).
NN insertion between amino acids 136 and 137.
39 samples were genotyped in 2008, giving a total of 105 samples genotyped for the pfk13 gene.