Table 2.

Evaluation of tissue GRNs generated by GENIE3

KN1	AUROC	AUPR	FEA4	AUROC	AUPR	O2	AUROC	AUPR
Random	0.500	0.108	random	0.500	0.103	random	0.500	0.061
SAM	0.558	0.187	leaf	0.545	0.147	seed	0.496	0.07
Seed	0.554	0.193	root	0.541	0.14
			SAM	0.56	0.171
			seed	0.533	0.15

AUROC and AUPR values were calculated tissue GRNs using three TFs’ ChIP-Seq data (KN1, FEA4 and O2). The random networks (random) were permutated 10,000 times. The leaf, root, SAM and seed refer to tissue-specific GRN