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. 2018 Jan 8;32(5):2467–2477. doi: 10.1096/fj.201701098R

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This is an Open Access article distributed under the terms of the Creative Commons Attribution 4.0 International (CC BY 4.0) (http://creativecommons.org/licenses/by/4.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 5. — Involvement of TEs in dynamic chromatin changes upon decidualization. A) Relative frequency of ATAC-seq peaks overlapping repetitive elements identified by RepeatMasker. Of the six most abundant TE families in ATAC-seq peaks, only one [chicken repeat 1 (CR1)] exceeds the frequency that is expected by chance. B) The frequency of TE families was also determined across 180,000 open chromatin peaks. The y axis indicates the frequency of each family across bins of 10,000 peaks that are ranked on the x axis from the most opening (1) to the most closing peak (185,084).