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. 2018 Feb 23;34(14):2349–2355. doi: 10.1093/bioinformatics/bty104

Fig. 2.

Fig. 2.

An illustration of the integrated HMM with array and WES data. ci indicates hidden states at position i; ySNP/WES,i indicates observation of normalized intensity score at position i; bSNP/WES,i indicates observation of BAF at position i. Specifically in hidden state c4, since there is no variants BAF from WES, we assign 0