Table 1. Positive selection on tree shrew TRPV1.
N# | lnL0 | lnL1 | 2ΔlnL | P value | omega | Positive selection sites |
---|---|---|---|---|---|---|
6 | −5816.62 | −5809.48 | 14.28** | 1.58E−4 | 7.28 | 30H, 35T*, 42R, 44P, 48R, 55E, 57G, 75P, 92S, 95D, 100C, 101R, 113L, 114K, 130T, 144K, 145K*, 152E, 166K, 309K, 561I, 569C, 579M, 632D*, 633R*, 635R*, 636T*, 637S, 642M, 722M |
# number of sequences
* present 5% significant level
** present 1% significant level.
Abbreviation: lnL, log likelihood; TRPV1, transient receptor potential vanilloid type-1.