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. Author manuscript; available in PMC: 2019 Aug 1.
Published in final edited form as: Hum Mutat. 2018 Jun 5;39(8):1061–1069. doi: 10.1002/humu.23553

Table 2.

Summary of performance characteristics of existing pMSAs and the optimized pMSA for Align-GVGD (C15 cut-off)

Alignment Species (n) Average n substitutions/position AUC (95% CI) True Positives True Negatives False Positives False Negatives MCC
Human to Frog 8 2.15 0.862 (0.786, 0.937) 219 53 18 28 0.605
Human to Zebrafish 9 2.95 0.869 (0.795, 0.943) 219 54 17 28 0.616
Optimized pMSA 11 3.70 0.907 (0.881, 0.934) 220 54 17 27 0.622