Figure 3.
Conformation exchange in μs-ms timescale in Fag s 1 major cavity. (a) Difference between R2eff, ΔR2eff obtained using the lowest and the highest CPMG frequency (66.7 and 1000 Hz) as a function of Fag s 1 residues number. Residues showing ΔR2eff higher than 5 Hz are colored in red. (b) Fag s 1 and Bet v 1 cavity mapped using 3V as described in Material and Methods. Residues in conformation exchange are colored in red and the side chains that point towards the cavity are also shown. Residues with broadened resonances are colored in yellow (c) Zoom of some regions of Fag s 1 cavity showing crucial side chains forming specific bottlenecks; (f) Reaction coordinate diagram at 298 K.