Table 4.
Details of all cyanobacterial and proteobacterial sequences included in the study.
| OTU | Read count | Phylum | Order | Family | Bacterial species | Strain | Accession no. | Similarity (%) | Habitat | Type source/place |
|---|---|---|---|---|---|---|---|---|---|---|
| denovo0 | 22,341 | Cyanobacteria | Synechococcales | Synechococcaceae | Synechococcus rubescens | SAG 3.81 | NR_125481.1 | 99 | Freshwater | Deep subalpine lakes (central Europe), lake Biwa (Japan), lake Balaton (Hungary), the Baltic Sea |
| denovo1 | 3,758 | Cyanobacteria | Synechococcales | Synechococcaceae | Synechococcus rubescens | SAG 3.81 | NR_125481.1 | 99 | Freshwater | Deep subalpine lakes (central Europe), lake Biwa (Japan), lake Balaton (Hungary), the Baltic Sea |
| denovo11 | 686 | Cyanobacteria | Synechococcales | Prochloraceae | Prochlorococcus marinus | PCC 9511 | NR_125480.1 | 97 | Seawater | North Atlantic, Mediterranean Sea |
| denovo15 | 993 | Cyanobacteria | Synechococcales | Synechococcaceae | Synechococcus rubescens | SAG 3.81 | NR_125481.1 | 99 | Freshwater | Deep subalpine lakes (central Europe), Lake Biwa (Japan), Lake Balaton (Hungary), the Baltic Sea |
| denovo105 | 38 | Cyanobacteria | Synechococcales | Synechococcaceae | Synechococcus rubescens | SAG 3.81 | NR_125481.1 | 97 | Freshwater | Deep subalpine lakes (central Europe), lake Biwa (Japan), lake Balaton (Hungary), the Baltic Sea |
| denovo150 | 35 | Cyanobacteria | Nostocales | Nostocaceae | Cronbergia siamensis | SAG 11.82 | NR_153750.1 | 96 | NA | Germany |
| denovo189 | 19 | Cyanobacteria | Synechococcales | Synechococcaceae | Synechococcus elongatus | PCC 6301 | NR_074309.1 | 98 | Freshwater | California |
| denovo261 | 12 | Cyanobacteria | Chroococcales | Aphanothecaceae | Gloeothece membranacea | PCC 6501 | NR_119092.1 | 96 | NA | USA |
| denovo2 | 7,122 | γ-Proteobacteria | Chromatiales | Chromatiaceae | Nitrosococcus halophilus | Nc 4 | NR_074790.1 | 93 | Marine | USA |
| denovo5 | 1,382 | γ-Proteobacteria | Legionellales | Coxiellaceae | Coxiella burnetii | ATCC VR-615 | NR_104916.1 | 92 | NA | USA |
| denovo7 | 1,364 | γ-Proteobacteria | Chromatiales | Ectothiorhodospiraceae | Thioalkalivibrio nitratireducens | DSM 14787 | NR_102486.1 | 96 | NA | Russia |
| denovo10 | 1,565 | α-Proteobacteria | Kordiimonadales | Kordiimonadaceae | Kordiimonas lipolytica | M41 | NR_149297.1 | 92 | Seawater | China |
| denovo14 | 822 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Boseongicola aestuarii | BS-W15 | NR_133983.1 | 99 | Sediment | Tidal flat sediment, South Korea |
| denovo18 | 696 | γ-Proteobacteria | Oceanospirillales | Halomonadaceae | Halomonas flava | YIM 94343 | NR_109317.1 | 93 | Soil | Soil from salt lake, Qijiaojing Lake, China |
| denovo20 | 499 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Oceanicola litoreus | M-M22 | NR_118461.1 | 96 | Sediment | Seashore sediment, Geoje island, South Korea |
| denovo21 | 340 | α-Proteobacteria | Rhizobiales | Hyphomicrobiaceae | Methyloterrigena soli | M48 | NR_147729.1 | 92 | Soil | Activated sludge, Republic of Korea |
| denovo29 | 276 | γ-Proteobacteria | Oceanospirillales | Hahellaceae | Kistimonas asteriae | KMD 001 | NR_116386.1 | 95 | NA | Republic of Korea |
| denovo31 | 274 | α-Proteobacteria | Pelagibacterales | Pelagibacteraceae | Candidatus Pelagibacterubique | HTCC1062 | NR_074224.1 | 99 | Seawater | USA |
| denovo32 | 1086 | α-Proteobacteria | Pelagibacterales | Pelagibacteraceae | Candidatus Pelagibacterubique | HTCC1062 | NR_074224.1 | 100 | Seawater | USA |
| denovo33 | 244 | γ-Proteobacteria | Chromatiales | Chromatiaceae | Halochromatium glycolicum | BN 3201 | NR_044896.1 | 95 | NA | Germany |
| denovo39 | 105 | γ-Proteobacteria | Chromatiales | Woeseiaceae | Woeseia oceani | XK5 | NR_147719.1 | 93 | Sediment | Coastal sediment, Xiaoshi Island, Weihai, China |
| denovo42 | 152 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Amylibacter ulvae | KMM 6515 | NR_146351.1 | 99 | NA | Republic of Korea |
| denovo44 | 99 | α-Proteobacteria | Rhodospirillales | Rhodospirillaceae | Tistrella mobilis | NBRC 102134 | NR_114036.1 | 95 | NA | Japan |
| denovo46 | 65 | γ-Proteobacteria | Chromatiales | Woeseiaceae | Woeseia oceani | XK5 | NR_147719.1 | 98 | Sediment | Coastal sediment, Xiaoshi Island, Weihai, China |
| denovo50 | 142 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Pseudoruegeria aestuarii | MME-001 | NR_151932.1 | 96 | Sediment | Tidal flat of Muui-do, Republic of Korea |
| denovo54 | 65 | α-Proteobacteria | Kordiimonadales | Kordiimonadaceae | Kordiimonas lipolytica | M41 | NR_149297.1 | 95 | Seawater | China |
| denovo56 | 159 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Ruegeria conchae | TW15 | NR_109062.1 | 100 | Ark clam | Strain: Scapharca broughtonii, South Korea |
| denovo59 | 79 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Rhodovulum strictum | MB-G2 | NR_025845.1 | 95 | Seawater | Tidal and seawater pools, Japan |
| denovo62 | 73 | α-Proteobacteria | Pelagibacterales | Pelagibacteraceae | Candidatus Pelagibacterubique | HTCC1062 | NR_074224.1 | 94 | Seawater | USA |
| denovo66 | 131 | γ-Proteobacteria | Oceanospirillales | Oceanospirillaceae | Neptunomonas qingdaonensis | P10-2-4 | NR_109382.1 | 94 | Sand | Coastal area of Qingdao (Yellow Sea), China |
| denovo67 | 36 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Catellibacterium aquatile | NBRC 104254 | NR_114265.1 | 96 | NA | Japan |
| denovo68 | 68 | α-Proteobacteria | Kordiimonadales | Kordiimonadaceae | Kordiimonas lipolytica | M41 | NR_149297.1 | 92 | Seawater | China |
| denovo70 | 81 | γ-Proteobacteria | Cellvibrionales | Halieaceae | Haliea mediterranea | 7SM29 | NR_116976.1 | 99 | Seawater | Mediterranean sea water, Spain |
| denovo80 | 36 | γ-Proteobacteria | Thiotrichales | Francisellaceae | Francisella halioticida | Shimane-1 | NR_112804.1 | 99 | Abalone | Strain: Haliotis gigantean, Japan |
| denovo82 | 41 | γ-Proteobacteria | Oceanospirillales | Hahellaceae | Endozoicomonas numazuensis | HC50 | NR_114318.1 | 99 | Sponge | Strain: Haliclona sp., Coast of Numazu, Japan |
| denovo87 | 49 | α-Proteobacteria | Sphingomonadales | Sphingomonadaceae | Novosphingobium tardaugens | NBRC 16725 | NR_113869.1 | 99 | NA | Japan |
| denovo90 | 31 | γ-Proteobacteria | Oceanospirillales | Alteromonadaceae | Marinobacterium marisflavi | IMCC4074 | NR_125520.1 | 93 | Seawater | Atlantic Ocean, Yellow Sea, Incheon, Republic of Korea |
| denovo92 | 33 | γ-Proteobacteria | Oceanospirillales | Alteromonadaceae | Marinobacterium mangrovicola | Gal22 | NR_134077.1 | 97 | Mangrove | Mangrove roots of Rhizophora mangle, Germany |
| denovo93 | 83 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Actibacterium atlanticum | 22II-S11-z10 | NR_136418.1 | 96 | NA | China |
| denovo94 | 56 | γ-Proteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas mucidolens | NBRC 103159 | NR_114225.1 | 100 | NA | Japan |
| denovo95 | 35 | γ-Proteobacteria | Chromatiales | Chromatiaceae | Halochromatium salexigens | 6310: DSM 4395 | NR_036810.1 | 94 | Freshwater | Germany |
| denovo98 | 25 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Pelagibaca abyssi | JLT2014 | NR_148263.1 | 97 | Seawater | China |
| denovo99 | 57 | α-Proteobacteria | Rhizobiales | Methylocystaceae | Terasakiella brassicae | B3 | NR_148851.1 | 93 | Wastewater | Wastewater of a pickle-processing factory, China |
| denovo100 | 19 | γ-Proteobacteria | Oceanospirillales | Hahellaceae | Endozoicomonas euniceicola | EF212 | NR_109684.2 | 98 | Octocoral | Strain: Eunicea fusca and Plexaura sp., coast of Florida, USA, and the coast of Bimini, Bahamas |
| denovo101 | 22 | α-Proteobacteria | Rhodospirillales | Acetobacteraceae | Craurococcus roseus | NS130 | NR_036877.1 | 92 | Soil | Japan |
| denovo103 | 50 | α-Proteobacteria | Rhodospirillales | Rhodospirillaceae | Nisaea denitrificans | DR41_21 | NR_043923.1 | 95 | Seawater | Coastal, surface waters of the north-western Mediterranean Sea, France |
| denovo104 | 32 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Pelagibaca abyssi | JLT2014 | NR_148263.1 | 95 | Seawater | China |
| denovo110 | 35 | γ-Proteobacteria | Cellvibrionales | Halieaceae | Haliea mediterranea | 7SM29 | NR_116976.1 | 98 | Seawater | Mediterranean sea water, Spain |
| denovo112 | 15 | α-Proteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingopyxis italica | SC13E-S71 | NR_108877.1 | 93 | Soil | Tuff, volcanic rock of the Roman catacombs, Rome, Italy |
| denovo116 | 29 | γ-Proteobacteria | – | – | Thiolapillus brandeum | Hiromi 1 | NR_148757.1 | 95 | Hydrothermal vent | Hydrothermal vent chimney, Okinawa, Japan |
| denovo117 | 62 | γ-Proteobacteria | Cellvibrionales | Halieaceae | Luminiphilus syltensis | Ivo14 | NR_125526.1 | 98 | Sediment | Tidal flat, island of Sylt, North Sea, Germany |
| denovo119 | 19 | α-Proteobacteria | Rhizobiales | Rhodobiaceae | Pyruvatibacter mobilis | GYP-11 | NR_147733.1 | 95 | Microalga | Marine microalga, Strain: Picochloruma sp., China |
| denovo123 | 37 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Rhodovulum sulfidophilum | KC2142 | NR_115746.1 | 92 | Clinical sample | USA |
| denovo125 | 39 | α-Proteobacteria | Rhizobiales | Phyllobacteriaceae | Hoeflea phototrophica | NCIMB 14078 | NR_118230.1 | 96 | Seawater | Yellow Sea, Republic of Korea |
| denovo126 | 14 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Paenirhodobacter enshiensis | DW2-9 | NR_125604.1 | 98 | Soil | Sewage outlet of the Bafeng pharmaceutical factory, Enshi, Hubei province, PR China |
| denovo130 | 16 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Labrenzia alba | 5OM6 | NR_042378.1 | 99 | Oyster | Mediterranean coast, Spain |
| denovo131 | 60 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Paracoccus cavernae | 0511ARD5E5 | NR_149299.1 | 95 | Air | Ardales Cave,Malaga, Spain |
| denovo135 | 35 | γ-Proteobacteria | Cellvibrionales | Halieaceae | Marimicrobium arenosum | CAU1038 | NR_148595.1 | 94 | Sea sand | Modo, Republic of Korea |
| denovo136 | 42 | γ-Proteobacteria | Cellvibrionales | Cellvibrionaceae | Eionea nigra | 17X/A02/237 | NR_115270.1 | 92 | Water | Waters of the coastal north-western Mediterranean Sea, France |
| denovo137 | 14 | γ-Proteobacteria | Oceanospirillales | Hahellaceae | Endozoicomonas ascidiicola | AVMART05 | NR_146693.1 | 95 | Ascidian | Ascidiella sp., Gullmarsfjord, Sweden |
| denovo139 | 36 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Roseibacterium elongatum | DFL-43 | NR_121734.1 | 98 | Sand | Australia |
| denovo140 | 20 | γ-Proteobacteria | Cellvibrionales | Microbulbiferaceae | Microbulbifer chitinilyticus | ABABA 212 | NR_112918.1 | 97 | Mangrove | Mangrove forests, Okinawa, Japan |
| denovo141 | 20 | α-Proteobacteria | Rhodospirillales | Rhodospirillaceae | Magnetospirillum marisnigri | SP-1 | NR_149242.1 | 93 | Freshwater | Sediments, three distinct locations in European Russia |
| denovo143 | 12 | γ-Proteobacteria | Legionellales | Coxiellaceae | Coxiella burnetii | ATCC VR-615 | NR_104916.1 | 97 | NA | USA |
| denovo146 | 23 | α-Proteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingopyxis fribergensis | Kp5.2 | NR_137271.1 | 94 | Soil | Saxony, Germany |
| denovo147 | 15 | γ-Proteobacteria | Cellvibrionales | Halieaceae | Haliea atlantica | SM1351 | NR_137377.1 | 94 | Seawater | Surface seawater of the Atlantic Ocean |
| denovo148 | 24 | γ-Proteobacteria | Oceanospirillales | Halomonadaceae | Larsenimonas suaedae | ST307 | NR_151924.1 | 95 | Seepweed | Euhalophyte Suaeda salsa, Dongying, China |
| denovo151 | 18 | α-Proteobacteria | Rhodospirillales | Rhodospirillaceae | Nisaea nitritireducens | DR41_18 | NR_043924.1 | 94 | Water | Coastal, surface waters of the north-western Mediterranean Sea, France |
| denovo153 | 13 | γ-Proteobacteria | Oceanospirillales | Oceanospirillaceae | Neptunomonas japonica | JAMM 0745 | NR_041567.1 | 95 | Sediment | Sediment adjacent to sperm whale carcasses off Kagoshima, Japan |
| denovo162 | 22 | α-Proteobacteria | Rhizobiales | Bradyrhizobiaceae | Bradyrhizobium lupini | USDA 3051 | NR_134836.1 | 100 | Nodule | Spain |
| denovo165 | 32 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Boseongicola aestuarii | BS-W15 | NR_133983.1 | 98 | Sediment | Tidal flat sediment, South Korea |
| denovo169 | 24 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Phaeobacter caeruleus | DSM 24564 | NR_118542.1 | 99 | Marine biofilm | Biofilm on stainless steel electrode, Genoa harbor, Italy |
| denovo173 | 10 | α-Proteobacteria | Kiloniellales | Kiloniellaceae | Kiloniella laminariae | LD81 | NR_042646.1 | 95 | Marine macroalga | Strain: Laminaria saccharina,:Baltic Sea, Germany |
| denovo177 | 16 | α-Proteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingorhabdus pacifica | n34 | NR_134813.1 | 99 | Sediment | Sandy sediments of the Sea of Japan seashore |
| denovo181 | 16 | γ-Proteobacteria | Chromatiales | Chromatiaceae | Nitrosococcus halophilus | Nc 4 | NR_074790.1 | 93 | Marine | USA |
| denovo186 | 11 | γ-Proteobacteria | Chromatiales | Woeseiaceae | Woeseia oceani | XK5 | NR_147719.1 | 98 | Sediment | Coastal sediment, Xiaoshi Island, Weihai, China |
| denovo188 | 9 | γ-Proteobacteria | Legionellales | Legionellaceae | Legionella thermalis | L-47 | NR_146358.1 | 94 | Water | Hot spring water, Tokyo, Japan |
| denovo192 | 16 | γ-Proteobacteria | Chromatiales | Ectothiorhodospiraceae | Ectothiorhodospira mobilis | DSM 237 | NR_125567.1 | 93 | NA | NA |
| denovo193 | 9 | α-Proteobacteria | Rhizobiales | Rhodobiaceae | Anderseniella baltica | BA141 | NR_042626.1 | 98 | Sediment | Surface of sediment in a deep basin of the central Baltic Sea, Germany |
| denovo194 | 37 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Agaricicola taiwanensis | CC-SBABM117 | NR_125534.1 | 96 | Edible mushroom | Strain: Agaricus blazei, China |
| denovo199 | 10 | α-Proteobacteria | Rickettsiales | Rickettsiaceae | Rickettsia raoultii | Khabarovsk | NR_043755.1 | 95 | Tick | Strain: Dermacentor silvarum, Russia, France |
| denovo201 | 8 | γ-Proteobacteria | Xanthomonadales | Xanthomonadaceae | Stenotrophomonas maltophilia | ATCC 19861 | NR_040804.1 | 100 | NA | Japan |
| denovo204 | 8 | β-Proteobacteria | Nitrosomonadales | Methylophilaceae | Methylobacillus glycogenes | TK 0113 | NR_104760.1 | 96 | NA | NA |
| denovo206 | 8 | γ-Proteobacteria | Cellvibrionales | Microbulbiferaceae | Microbulbifer gwangyangensis | GY2 | NR_118158.1 | 98 | Seawater | Tidal flat at Gwangyang Bay, Korea |
| denovo207 | 8 | γ-Proteobacteria | Alteromonadales | Colwelliaceae | Thalassomonas agarivorans | TMA1 | NR_043649.1 | 99 | Water | Shallow coastal water of An-Ping Harbor, Taiwan |
| denovo208 | 14 | α-Proteobacteria | Rhizobiales | Chelatococcaceae | Chelatococcus reniformis | B2974 | NR_152704.1 | 96 | Ice core | Muztagh Glacier, on the Tibetan Plateau, China |
| denovo210 | 15 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Silicimonas algicola | KC90B | NR_152708.1 | 98 | Diatom | Cell surface of the marine diatom, strain: Thalassiosira delicatula, France |
| denovo211 | 8 | α-Proteobacteria | Rhizobiales | Hyphomicrobiaceae | Devosia albogilva | IPL15 | NR_044212.1 | 99 | Marine sediment | Yueqing Bay, Zhejiang Province, China |
| denovo212 | 28 | γ-Proteobacteria | Cellvibrionales | Microbulbiferaceae | Microbulbifer yueqingensis | Y226 | NR_108574.1 | 95 | Dump | Hexachlorocyclohexane dump site, India |
| denovo213 | 7 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Oceanicola litoreus | M-M22 | NR_118461.1 | 99 | Sediment | Seashore sediment, Geoje island, South Korea |
| denovo216 | 9 | γ-Proteobacteria | Legionellales | Coxiellaceae | Coxiella burnetii | ATCC VR-615 | NR_104916.1 | 97 | NA | USA |
| denovo217 | 23 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Nautella italica | LMG 24365 | NR_042673.1 | 100 | Marine biofilm | Marine electroactive biofilm, Genova harbor, Italy |
| denovo220 | 11 | β-Proteobacteria | Nitrosomonadales | Methylophilaceae | Methylobacillus flagellatus | KT | NR_074178.1 | 96 | NA | USA |
| denovo221 | 23 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Poseidonocella pacifica | KMM 9010 | NR_113209.1 | 99 | Sediments | Shallow sandy sediments of the Sea of Japan |
| denovo226 | 29 | β-Proteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia pickettii | NBRC 102503 | NR_114126.1 | 100 | NA | Japan |
| denovo228 | 14 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Pseudoruegeria marinistellae | SF-16 | NR_149190.1 | 99 | Starfish | Sanya, China |
| denovo229 | 7 | α-Proteobacteria | Rhizobiales | Rhizobiaceae | Rhizobium gei | ZFJT-2 | NR_152093.1 | 97 | Plant | Stem of Geum aleppicum, Taibai Mountain, Shaanxi Province, north-west China |
| denovo230 | 16 | γ-Proteobacteria | Oceanospirillales | Kangiellaceae | Kangiella chungangensis | CAU 1040 | NR_148305.1 | 92 | Marine sand | Jeju Island, South Korea |
| denovo232 | 7 | α-Proteobacteria | Rhizobiales | Rhizobiaceae | Rhizobium rosettiformans | W3 | NR_116445.1 | 100 | Ground water | Lucknow, India |
| denovo234 | 14 | α-Proteobacteria | Caulobacterales | Caulobacteraceae | Caulobacter mirabilis | FWC 38 | NR_041964.1 | 97 | Freshwater | Germany |
| denovo235 | 10 | α-Proteobacteria | Rhizobiales | - | Methyloceanibacter caenitepidi | Gela4 | NR_125465.1 | 99 | Marine sediment | Near a hydrothermal vent, Japan |
| denovo237 | 14 | α-Proteobacteria | Kiloniellales | Kiloniellaceae | Kiloniella litopenaei | P1-1 | NR_148331.1 | 92 | Soil | Hoh Xil basin, China |
| denovo243 | 8 | γ-Proteobacteria | Cellvibrionales | Halieaceae | Marimicrobium arenosum | CAU1038 | NR_148595.1 | 95 | Sea sand | Modo, Republic of Korea |
| denovo249 | 11 | γ-Proteobacteria | - | - | Thiolapillus brandeum | Hiromi 1 | NR_148757.1 | 93 | Hydrothermal vent | Hydrothermal vent chimney, Okinawa, Japan |
| denovo253 | 14 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Roseovarius crassostreae | CV919-312 | NR_041731.1 | 99 | Oyster | Damariscotta River, USA |
| denovo258 | 10 | α-Proteobacteria | Rhizobiales | Hyphomicrobiaceae | Devosia albogilva | IPL15 | NR_044212.1 | 98 | Marine sediment | Yueqing Bay, Zhejiang Province, China |
| denovo264 | 8 | γ-Proteobacteria | Oceanospirillales | - | Oceanospirillum beijerinckii | NBRC 15445 | NR_113754.1 | 95 | NA | Japan |
| denovo274 | 11 | α-Proteobacteria | Rhizobiales | Rhodobiaceae | Rhodobium gokarnense | JA173 | NR_042475.1 | 95 | Salt pan | Saltern Gokarna, India |
| denovo275 | 7 | α-Proteobacteria | Kordiimonadales | Kordiimonadaceae | Kordiimonas sediminis | N39 | NR_149185.1 | 94 | Sediment | Sample collected at a sea cucumber culture pond in Weihai, China |
| denovo276 | 9 | α-Proteobacteria | Rhizobiales | Rhizobiaceae | Rhizobium flavum | YW14 | NR_133843.1 | 100 | Soil | China |
| denovo279 | 8 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Ahrensia kielensis | NBRC 15762 | NR_113807.1 | 96 | NA | Japan |
| denovo280 | 7 | α-Proteobacteria | Rhizobiales | Hyphomicrobiaceae | Devosia crocina | IPL20 | NR_044213.1 | 92 | Dump | hexachlorocyclohexane dump site, India |
| denovo281 | 8 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Aestuariivita boseongensis | BS-B2 | NR_133957.1 | 98 | Sediment | Tidal flat sediment, Boseong, South Korea |
| denovo284 | 18 | α-Proteobacteria | Pelagibacterales | Pelagibacteraceae | Candidatus Pelagibacterubique | HTCC1062 | NR_074224.1 | 95 | Seawater | USA |
| denovo287 | 11 | α-Proteobacteria | Rhizobiales | Hyphomicrobiaceae | Devosia chinhatensis | IPL18 | NR_044214.1 | 95 | Dump | Hexachlorocyclohexane (HCH) dump site, India |
| denovo290 | 7 | γ-Proteobacteria | Chromatiales | Woeseiaceae | Woeseia oceani | XK5 | NR_147719.1 | 97 | Sediment | Coastal sediment, Xiaoshi Island, Weihai, China |
| denovo292 | 8 | α-Proteobacteria | Rhizobiales | Hyphomicrobiaceae | Bauldia litoralis | 524-16 | NR_117251.1 | 93 | NA | NA |
| denovo293 | 7 | α-Proteobacteria | Rhodobacterales | Rhodobacteraceae | Loktanella litorea | DPG-5 | NR_118329.1 | 100 | Seawater | The South Sea, Republic of Korea |
| denovo295 | 8 | γ-Proteobacteria | Pseudomonadales | Moraxellaceae | Acinetobacter lwoffii | JCM 6840 | NR_113346.1 | 100 | NA | Japan |
| denovo300 | 8 | α-Proteobacteria | Rhodospirillales | Rhodospirillaceae | Limibacillus halophilus | CAU 1121 | NR_137248.1 | 96 | Soil | Reclaimed land in the Republic of Korea |
| denovo306 | 9 | γ-Proteobacteria | Chromatiales | Granulosicoccaceae | Granulosicoccus undariae | W-BA3 | NR_134740.1 | 94 | Brown algae | Brown algae reservoir in Wando of South Korea |
| denovo319 | 9 | γ-Proteobacteria | Chromatiales | Woeseiaceae | Woeseia oceani | XK5 | NR_147719.1 | 95 | Sediment | Coastal sediment, Xiaoshi Island, Weihai, China |
| denovo323 | 13 | α-Proteobacteria | Rhodobacterales | Hyphomonadaceae | Hellea balneolensis | 26III/A02/215 | NR_042992.1 | 97 | Freshwater | Surface water of the north-western Mediterranean Sea, France |
| denovo327 | 7 | γ-Proteobacteria | – | – | Thiohalobacter thiocyanaticus | HRh1 | NR_116699.1 | 93 | Sediment | Mixed sediment from hypersaline chloride-sulfate lakes, Kulunda Steppe, Russia |
| denovo331 | 9 | γ-Proteobacteria | Methylococcales | Methylococcaceae | Methyloparacoccus murrellii | R-49797 | NR_133784.1 | 93 | Pond water | South Africa |
| denovo333 | 7 | α-Proteobacteria | Rhizobiales | Methylobacteriaceae | Methylobacterium radiotolerans | JCM 2831 | NR_074244.1 | 100 | NA | NA |
| denovo337 | 8 | γ-Proteobacteria | Cellvibrionales | Halieaceae | Halioglobus japonicus | S1-36 | NR_113277.1 | 100 | Seawater | North-western Pacific Ocean near Japan |
OTU was determined based on a 16S rRNA gene similarity of 90%.
NA, Not available.