Table 2. Select differentially-expressed genes in recurrent GBM.
Upregulated in recurrence | |||
---|---|---|---|
Gene name | Gene symbol | Relative expression | P-value |
transferrin | TF | 5.34 | 0.0085 |
interferon-induced protein with tetratricopeptide repeats 2 | IFIT2 | 3.54 | 0.0006 |
apoptosis-associated tyrosine kinase | AATK | 3.38 | 0.0125 |
cyclin-dependent kinase 18 | CDK18 | 3.30 | 0.0292 |
breast carcinoma amplified sequence 1 | BCAS1 | 2.94 | 0.0221 |
microtubule-associated protein 7 | MAP7 | 2.59 | 0.0101 |
fibroblast growth factor receptor 2 | FGFR2 | 2.42 | 0.0400 |
ferritin, light polypeptide | FTL | 2.35 | 0.0025 |
fibroblast growth factor 1 | FGF1 | 2.22 | 0.0058 |
signal transducer and activator of transcription 1 | STAT1 | 2.08 | 0.0019 |
lysosomal-associated membrane protein 2 | LAMP2 | 1.78 | 0.0008 |
Downregulated in recurrence | |||
---|---|---|---|
Gene name | Gene symbol | Relative expression | P-value |
neurocan | NCAN | 0.26 | 0.0433 |
glutamate receptor, ionotropic, AMPA 2 | GRIA2 | 0.45 | 0.0334 |
fatty acid binding protein 7, brain | FABP7 | 0.48 | 0.0236 |
ets variant 1 | ETV1 | 0.49 | 0.0209 |
nestin | NES | 0.52 | 0.0370 |
TNF receptor-associated factor 4 | TRAF4 | 0.53 | 0.0334 |
melanoma antigen family D, 4 | MAGED4 | 0.54 | 0.0076 |
neuro-oncological ventral antigen 1 | NOVA1 | 0.55 | 0.0330 |
P-values calculated using a two-sided Student’s T-Test