Table 3. SPR Data Showing a Higher Binding Affinity for G-Quadruplex DNAa.
h-telo 22-mer |
duplex DNA 26-mer |
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ligands | KD (μM) | KA (M–1) | ΔG° (kcal/mol) | KD (μM) | KA (M–1) | ΔG° (kcal/mol) | KA h-telo 22/KA dsDNA |
ALI-C3 | 0.84 | 8.7 × 106 | –6.95 | 17.1 | 0.1 × 106 | –6.12 | 87.0 |
BBZ-ARO | 0.64 | 9.5 × 107 | –8.12 | 36.6 | 0.6 × 106 | –6.43 | 158.3 |
BBZ-AROCH2 | 0.26 | 1.4 × 106 | –6.14 | 55.2 | 0.4 × 106 | –6.12 | 3.5 |
BMSG-SH-3 | 0.27 | 2.7 × 106 | –6.37 | 44.7 | 0.8 × 106 | –6.83 | 4.3 |
Error levels for KA and KD values were ±15%.