Table 2.
AMR and integron genes in DEC strains isolated from children and adults
| AMR genes | AMR and integron genes in DEC strains with isolated from children | AMR and integron genes in DEC strains with isolated from adults | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DEC single and co-infection | Hybrid DEC infection | Total | DEC single and co-infection | Hybrid infection | Total | |||||||||||||
| Typical EPEC | Atypical EPEC | ETEC | EIEC | EAEC | EHEC | EAEC + atypical EPEC | EHEC + EIEC | Atypical EPEC | ETEC | EAEC | EHEC | EPEC/ETEC (Hybrid) | ||||||
| eaeA&bfpA | eaeA | bfpA | lt | ial | aggR | stx1 | aggR/bfpA | aggR/bfpA | ial/stx1 | eaeA | bfpA | eaeA/bfpA/lt + bfpA | aggR | stx1 | eaeA/bfpA/lt | |||
| qnrA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| qnrB | 0 | 2 | 6 | 3 | 1 | 4 | 0 | 0 | 1 | 1 | 18 | 1 | 1 | 1 | 0 | 0 | 0 | 3 |
| qnrS | 2 | 3 | 6 | 3 | 2 | 3 | 1 | 0 | 1 | 0 | 21 | 0 | 1 | 2 | 0 | 0 | 0 | 3 |
| qnrC | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| qeqA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| aac(6′)-Ib | 0 | 4 | 9 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 23 | 0 | 1 | 1 | 2 | 0 | 0 | 4 |
| sul1 | 3 | 5 | 14 | 5 | 3 | 5 | 4 | 0 | 1 | 0 | 40 | 0 | 2 | 0 | 2 | 0 | 0 | 4 |
| sulII | 2 | 4 | 9 | 3 | 2 | 4 | 3 | 1 | 0 | 1 | 29 | 1 | 3 | 1 | 2 | 1 | 0 | 8 |
| sulIII | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 6 | 1 | 1 | 1 | 1 | 0 | 0 | 4 |
| dhfr1 | 3 | 1 | 6 | 3 | 2 | 4 | 2 | 1 | 1 | 1 | 24 | 0 | 1 | 0 | 2 | 0 | 0 | 3 |
| aac3 | 0 | 2 | 2 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| aadB | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 4 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
| tetA | 1 | 1 | 4 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 10 | 0 | 2 | 2 | 0 | 0 | 0 | 4 |
| tetD | 0 | 1 | 1 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| tetB | 1 | 2 | 4 | 2 | 0 | 1 | 1 | 0 | 1 | 0 | 12 | 1 | 1 | 0 | 1 | 0 | 0 | 3 |
| tetE | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| tetY | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| tetC | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| cat1 | 0 | 0 | 3 | 3 | 2 | 4 | 2 | 1 | 0 | 1 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| blaCTX | 0 | 2 | 3 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 9 | 0 | 3 | 4 | 1 | 0 | 0 | 8 |
| blaTEM | 1 | 2 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 0 | 13 | 0 | 3 | 2 | 0 | 0 | 0 | 5 |
| blaSHV | 1 | 0 | 5 | 3 | 0 | 2 | 2 | 1 | 0 | 0 | 14 | 0 | 2 | 2 | 1 | 1 | 0 | 6 |
| ermA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| mcr1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| int1 | 1 | 4 | 9 | 3 | 4 | 6 | 2 | 1 | 1 | 1 | 32 | 0 | 2 | 1 | 0 | 0 | 0 | 3 |
| int2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| int3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
DEC diarrhoeagenic E. coli, EPEC enteropathogenic E. coli, ETEC enterotoxigenic E. coli, EAEC enteroaggregative E. coli, EHEC enterohemorrhagic E. coli, EIEC enteroinvasive E. coli