Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2018 Jul 12;6:e5261. doi: 10.7717/peerj.5261

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2018 Petit and Read

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.

PMC Copyright notice

The presence of resistance genes was predicted by Ariba (Hunt et al., 2017) using the reference MegaRes (Lakin et al., 2017) database. The distribution MegaRes resistance classes for methicillin (A), aminoglycosides (B), fosfomycin (C) and macrolide-lincosamide-streptogramin (D) are presented for the top 10 sequence types (ST). The top 10 STs represent 70% (N = 29,851) of the genomes analyzed in this study. A breakdown of each remaining resistance class tested is available in the code repository.