Skip to main content
. 2018 Apr 18;218(4):614–623. doi: 10.1093/infdis/jiy214

Table 1.

Antigens Used in Various Assays

IAV Strain Abbreviation IAV Subtype Clade Pathogenicity Assay(s)a
A/NewCaledonia/20/1999 sH1N1 H1N1 Seasonal PA
A/Wyoming/3/03 sH3N2 H3N2 Seasonal PA
A/duck/Hokkaido/167/07 H5N3/07 H5N3 LPAI PA
A/duck/NY/191255–59/02 H5N8/02 H5N8 LPAI PA
A/HongKong/156/97 HK/97 H5N1 0 HPAI PA
A/Vietnam/1194/04 VN/04 H5N1 1 HPAI PA, HI, VN, ADCC, T cell
A/Cambodia/R0405050/07 CAM/07 H5N1 1.1 HPAI PA
A/Indonesia/5/05 IND/05 H5N1 2.1 HPAI PA, HI, VN, ADCC, T cell
A/duck/Hunan/795/02 HUN/02 H5N1 2.1.3.2 HPAI PA
A/Turkey/15/06 TUR/06 H5N1 2.2 HPAI PA
A/Egypt/N03072/10 Egypt/10 H5N1 2.2.1 HPAI PA
A/chicken/Egypt/0879-NLQP/08 Egypt/08 H5N1 2.2.1.1 HPAI PA
A/Egypt/N01753/14 Egypt/14 H5N1 2.2.1.2 HPAI HI and VN
A/Hubei/1/10 Hubei/10 H5N1 2.3.2.1 HPAI PA
A/duck/Bangladesh/19097/13 BANG/13 H5N1 2.3.2.1 HPAI HI and VN
A/Anhui/1/05 Anhui/05 H5N1 2.3.4 HPAI PA
A/Vietnam/HN31432M/08 VN/08 H5N1 2.3.4.2 HPAI PA
A/turkey/Germany-MV/R2472/14 tu/H5N8/14 H5N8 2.3.4.4 HPAI PA
A/Guangzhou/39715/14 H5N6/14 H5N6 2.3.4.4 HPAI HI and VN
A/chicken/Netherlands/EMC-3/14 ch/H5N8/14 H5N8 2.3.4.4 HPAI HI and VN
A/chicken/Yamaguchi/7/04 YAM/04 H5N1 2.5 HPAI PA
A/goose/Guiyang/337/06 GUI/06 H5N1 4 HPAI PA
A/chicken/Vietnam/NCVD-016/08 ch/VN/08 H5N1 7 HPAI PA
A/chicken/Jilin/9/04 JI/04 H5N1 HPAI PA

Abbreviations: ADCC, antibody-dependent cellular cytotoxicity; HI, hemagglutination inhibition; HPAI, high-pathogenicity avian influenza virus; IAV, influenza A virus; LPAI, low-pathogenicity avian influenza virus; PA, protein array; VN, virus neutralization.

aHemagglutinin subunit 1 (HA1) was used in PA analysis, viruses created using reverse-genetics techniques were used for HI/VN assays, and full-length HA was used for ADCC and T-cell assays.