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Specifications of alignments used for gene tree reconstruction with BEAST and MrBayes.
| Alignment | Number of sequences | Length (bp) | Variable sites | Parsimony informative sites | Missing data | Analysis | Substitution model |
|---|---|---|---|---|---|---|---|
| CAD | 353 | 736 | 37,6% | 28,0% | 1.5% | MrBayes | 1: GTR+I2: F813: HKY+G |
| CAD haplotypes | 136 | 736 | 31.8% | 26.4% | 1.6% | BEAST | 1: BMod2: BMod3: BMod |
| COI | 451 | 658 | 40,0% | 37,7% | 18.5% | MrBayes | 1: SYM+I+G2: F81+I3: GTR+I+G |
| COI haplotypes | 183 | 658 | 39.2% | 35.0% | 15.9% | BEAST | 1: BMod2: BMod3: BMod |
