Table 3.
MITE families associated with the TS and CYP genes of the clustered and global complements of the eudicot and monocot plants
| Plant group | ||
| Presence | Eudicots | Monocots |
| Clustered, overrepresented | Explorer (PIF/Harbinger) | MITE-adh, type H (PIF/Harbinger) |
| Snabo (Mutator) | Helia (PIF/Harbinger) | |
| mPIF (PIF/Harbinger) | ||
| MITE-adh-2 (Tc1/Mariner) | ||
| MDM (Mutator) | ||
| Pop | ||
| Clustered, underrepresented | MITE-adh-11 (Tc1/Mariner) | MITE-adh-8 (PIF/Harbinger) |
| Buhui (PIF/Harbinger) | ||
| ID-4 (PIF/Harbinger) | ||
| Amy/LTP (Mutator) | ||
| p-SINE1 | ||
| Talisker | ||
| Only clustered | MITE-adh, type J (Tc1/Mariner) | Not found |
| Only global | MITE-adh, type K (PIF/Harbinger) | Stola (PIF/Harbinger) |
| mPIF (PIF/Harbinger) | MITE-adh-6 (PIF/Harbinger) | |
| MITE-adh-2 (Tc1/Mariner) | ID-2 (PIF/Harbinger) | |
| MITE-adh-12 (Tc1/Mariner) | Casin (PIF/Harbinger) | |
| Frequent Flyer (Tc1/Mariner) | MITE-adh-10 (Mutator) | |
| MITE-adh-7 | ECR (Mutator) | |
| MITE-adh-3 (Tc1/Mariner) | ||
| MITE-adh-4 (Tc1/Mariner) | ||
| Delay (hAT) | ||
MITEs with twofold greater or lower abundance compared with the counterpart complement are shown. Those associated only with the clustered TS/CYP genes or only with the nonclustered global complement of TS and CYP genes are also represented. See Dataset S5 for additional information.