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. 2018 Mar 20;9(1):49–73. doi: 10.5598/imafungus.2018.09.01.05

Table 2.

Diagnostic bases within the Ustilago striiformis and the Ustilago serpens complexes.

Gen Loci
atp2 map ssc1 myosin rpl4A rpl3 sdh1 tif2 ITS
U. striiformis-complex Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base
on Agrostis gigantea x x x x x x x x x x x x 138 C / T x x x x
on Agrostis stolonifera and A. rupestris 466 A / G x x x x x x x x 92 A / G x x x x x x
on Alopecurus pratensis 358 A / G 192 G / T x x 83 T / C x x x x x x x x x x
on Arrhenatherum elatius 346 A / G x x 182 A / C x x x x x x x x x x x x
on Bromus inermis 191, 244 G / A x x 232 C / T x x 228, 311
292
A / G
x x x x 23 A / G 621 C / T
on Calamagrostis epigejos 91 A / G x x x x x x x x x x x x 65 T / C 102 T / C
on Calamagrostis villosa 535 T / C x x x x x x x x x x x x x x x x
on Dactylis glomerata x x x x 69, 198 A / G x x 120 T / C 40 A / G x x x x 617 A / G
on Deschampsia caespitosa 22, 94 A / G 227 T / C x x 133 A / G x x 199 T / C x x x x 576 A / G
on Festuca spp. and Lolium spp. x x x x 210, 214, 231
243
A / G
x x x x x x x x x x x x
on Holcus spp. x x x x x x x x 85 T / C 133 T / C x x x x 103 A / G
on Milium effusum 301 A / G x x x x x x x x x x x x x x 206 T / C
U. serpens-complex Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base Pos. Base
on Bromus inermis x x X x x x x x x x x x x x x x 260
629
C / T
G / A
on Calamagrostis epigejos 175 G / A 92 A / C 88, 99 C / G 70 A / G 7 C / G 28 G / T 13 G / A x x 215 C / T
181, 429, 496 T / C 203 C / T 93 G / A 225 T / C 91 T / C 25 G / T 522 T / -
352 A / G 255 G / T 187 G / T 100 A / G 597 A / T
606 A / G
on Elymus repens x x x x x x 93 A / G 232 T / C x x x x x x 157
170
A / G
C / T
on Phalaris arundinacea 85 G / A 208 A / G x x 141 C / A x x 91 T / C 58, 256 A / G x x 19 C / A
156 T / C 146 A / G 38 C / T
186, 596 A / -
188, 604 G / A

Slash (/) = instead of, x = no diagnostic bases.