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. 2018 Jul 17;19:271. doi: 10.1186/s12859-018-2260-9

Fig. 2.

Fig. 2

Diagram of HGT event and break point identification. a The searching starts with clustered discordant read pairs. Reads that fall within a search window of twice of the library size around the cluster are extracted. b If soft-clipped reads are available, an exact integration site can be inferred. c If only discordant read pairs are available, only an approximate integration site can be inferred