Table 3. Sample accessions, location, and GenBank Accession numbers for ITS, tef1α, rpb1, and rpb2 used in phylogenetic analysis.
Accession | Taxon | Location | GenBank Accession Numbers1 | |||
---|---|---|---|---|---|---|
ITS | tef1α | rpb1 | rpb2 | |||
WD2028 | Ganoderma boninense | Japan | KJ143905 | KJ143924 | KJ143944 | KJ143964 |
WD2085 | Ganoderma boninense | Japan | KJ143906 | KJ143925 | KJ143945 | KJ143965 |
102NC | Ganoderma curtisii | NC, USA | MG654074 | MG754727 | — | MG754851 |
223FL | Ganoderma curtisii | FL, USA | MG654167 | — | MG754785 | MG754854 |
238FL | Ganoderma curtisii | FL, USA | MG654171 | — | MG754786 | — |
CBS100131 | Ganoderma curtisii | NC, USA | JQ781848 | KJ143926 | KJ143946 | KJ143966 |
CBS100132 | Ganoderma curtisii | NC, USA | JQ781849 | KJ143927 | KJ143947 | KJ143967 |
UMNFL28 | Ganoderma curtisii | FL, USA | MG654097 | MG754728 | MG754788 | MG754856 |
UMNFL6 | Ganoderma curtisii | FL, USA | MG654093 | — | — | — |
UMNFL60 | Ganoderma curtisii | FL, USA | MG654105 | MG754729 | MG754789 | — |
UMNGA1 | Ganoderma curtisii | GA, USA | MG654117 | MG754731 | MG754791 | MG754857 |
UMNNC3 | Ganoderma curtisii | NC, USA | MG654130 | MG754732 | MG754794 | — |
124FL | Ganoderma curtisii f.sp. meredithiae | FL, USA | MG654188 | MG754734 | MG754805 | MG754861 |
UMNFL50 | Ganoderma curtisii f.sp. meredithiae | FL, USA | MG654103 | MG754735 | MG754806 | MG754862 |
UMNFL64 | Ganoderma curtisii f.sp. meredithiae | FL, USA | MG654106 | — | MG754807 | MG754863 |
Wei5491 | Ganoderma flexipes | Hainan, China | JQ781850 | – | – | KJ143968 |
Wei5494 | Ganoderma flexipes | Hainan, China | JN383979 | — | — | — |
Cui9166 | Ganoderma lingzhi | Shandong, China | KJ143907 | JX029974 | JX029982 | JX029978 |
Dai12479 | Ganoderma lingzhi | Anhui, China | JQ781864 | JX029975 | JX029983 | JX029979 |
Cui9207 | Ganoderma lucidum | Yunan, China | KJ143910 | KJ143928 | KJ143949 | KJ143970 |
K175217 | Ganoderma lucidum | United Kingdom | KJ143911 | KJ143929 | KJ143950 | KJ143971 |
MS183CA | Ganoderma lucidum | CA, USA | MG911000 | MG754723 | — | — |
MT26/10 | Ganoderma lucidum | Czech Republic | KJ143912 | KJ143930 | KJ143951 | — |
Rivoire4195 | Ganoderma lucidum | France | KJ143909 | — | KJ143948 | KJ143969 |
UMNUT1 | Ganoderma lucidum | UT, USA | MG654070 | MG754725 | MG754799 | — |
UMNUT7 | Ganoderma lucidum | UT, USA | MG654071 | MG754726 | MG754800 | — |
UMNUT8 | Ganoderma lucidum | UT, US | MG654072 | — | — | — |
UMNUT9 | Ganoderma lucidum | UT, US | MG654073 | — | — | — |
231NC | Ganoderma martinicense | NC, USA | MG654182 | MG754736 | MG754801 | — |
246TX | Ganoderma martinicense | TX, USA | MG654185 | MG754737 | MG754802 | MG754858 |
LIPSW-Mart08-44 | Ganoderma martinicense | Martinique | KF963257 | — | — | — |
LIPSW-Mart08-55 | Ganoderma martinicense | Martinique | KF963256 | — | — | — |
UMNAL2 | Ganoderma martinicense | AL, USA | MG654176 | — | — | — |
UMNSC7 | Ganoderma martinicense | SC, USA | MG654177 | — | — | MG754859 |
UMNTN1 | Ganoderma martinicense | TN, USA | MG654178 | MG754738 | MG754803 | MG754860 |
UMNTX3 | Ganoderma martinicense | TX, USA | — | MG754739 | MG754804 | — |
CWN04670 | Ganoderma multipileum | Tawian, China | KJ143913 | KJ143931 | KJ143952 | KJ143972 |
Dai9447 | Ganoderma multipileum | Hainan, China | KJ143914 | KJ143932 | KJ143953 | KJ143973 |
CBS265.88 | Ganoderma oregonense | OR, USA | JQ781875 | KJ143933 | KJ143954 | KJ143974 |
CBS266.88 | Ganoderma oregonense | WA, USA | JQ781876 | — | KJ143955 | KJ143975 |
UMNAK1 | Ganoderma oregonense | AK, USA | MG654190 | MG754740 | MG754808 | — |
UMNOR1 | Ganoderma oregonense | OR, USA | MG654194 | MG754741 | MG754809 | — |
330OR | Ganoderma polychromum | OR, USA | MG654196 | MG754742 | — | — |
BJ280CA | Ganoderma polychromum | CA, USA | MG910492 | — | — | — |
BJ316CA | Ganoderma polychromum | CA, USA | MG910493 | — | — | — |
MS343OR | Ganoderma polychromum | OR, USA | MG654197 | MG754743 | — | — |
UMNOR3 | Ganoderma polychromum | OR, USA | MG654204 | MG754744 | MG754810 | — |
MS187FL | Ganoderma ravenelii | FL, USA | MG654211 | MG754745 | MG754813 | MG754865 |
UMNFL187 | Ganoderma ravenelii | FL, USA | — | — | MG754814 | — |
UMNFL188 | Ganoderma ravenelii | FL, USA | — | MG754746 | MG754815 | — |
CBS194.76 | Ganoderma resinaceum | Netherlands | KJ143916 | KJ143934 | KJ143956 | |
Rivoire4150 | Ganoderma resinaceum | France | KJ143915 | — | KJ143957 | — |
103SC | Ganoderma sessile | SC, USA | MG654304 | — | — | — |
111TX | Ganoderma sessile | TX, USA | MG654306 | MG754747 | MG754816 | MG754866 |
113FL | Ganoderma sessile | FL, USA | MG654307 | MG754748 | — | MG754867 |
117TX | Ganoderma sessile | TX, USA | MG654309 | MG754749 | MG754817 | MG754868 |
165MO | Ganoderma sessile | MO, USA | MG654312 | — | MG754818 | — |
171FL | Ganoderma sessile | FL, USA | MG654316 | — | MG754819 | — |
228DC | Ganoderma sessile | DC, USA | MG654319 | MG754750 | MG754820 | MG754869 |
JV1209/27 | Ganoderma sessile | AZ, USA | KF605630 | KJ143937 | KJ143959 | KJ143976 |
NY00985711 | Ganoderma sessile | NY, US | KJ143918 | — | — | — |
UMNCA5 | Ganoderma sessile | CA, USA | MG910998 | — | — | — |
UMNFL10 | Ganoderma sessile | FL, USA | MG654227 | MG754753 | MG754821 | — |
UMNFL125 | Ganoderma sessile | FL, USA | MG654239 | MG754755 | MG754825 | — |
UMNFL19 | Ganoderma sessile | FL, USA | MG654230 | MG754754 | MG754822 | — |
UMNKY1 | Ganoderma sessile | KY, USA | MG654257 | MG754756 | MG754827 | — |
UMNMI22 | Ganoderma sessile | MI, USA | MG654269 | MG754757 | MG754828 | — |
UMNMI24 | Ganoderma sessile | MI, USA | MG654271 | MG754758 | MG754829 | — |
UMNNY14 | Ganoderma sessile | NY, US | MG654294 | — | MG754830 | — |
UMNOH4 | Ganoderma sessile | OH, USA | MG654298 | MG754759 | MG754831 | — |
UMNWV1 | Ganoderma sessile | WV, US | MG654302 | — | — | — |
Cui7691 | Ganoderma sichuanense | Guangdong, China | JQ781878 | — | — | — |
HMAS42798 (Holytype) | Ganoderma sichuanense | Sichuan, China | JQ781877 | — | — | — |
Dai9724 | Ganoderma tropicum | Hainan, China | JQ781879 | — | — | — |
Yuan3490 | Ganoderma tropicum | Yunnan, China | JQ781880 | KJ143938 | — | — |
Dai1275b | Ganoderma tsugae | CT, USA | KJ143919 | KJ143939 | KJ143960 | KJ143977 |
Dai12760 | Ganoderma tsugae | CT, USA | KJ143920 | KJ143940 | KJ143961 | KJ143978 |
MS182AZ | Ganoderma tsugae | AZ, USA | MG910999 | MG754864 | ||
UMNMI20 | Ganoderma tsugae | MI, USA | MG654324 | MG754764 | MG754836 | — |
UMNMI30 | Ganoderma tsugae | MI, USA | MG654326 | MH025362 | MG754837 | MG754871 |
UMNNC4 | Ganoderma tsugae | NC, USA | MG654329 | MG754765 | MG754838 | MG754872 |
LIPSW-Mart08-45 | Ganoderma tuberculosum | Martinique | KF96325 | — | — | — |
PLM684 | Ganoderma tuberculosum | FL, USA | MG654369 | MG754769 | — | — |
UMNFL160 | Ganoderma tuberculosum | FL, USA | MG654364 | — | MG754840 | — |
UMNFL82 | Ganoderma tuberculosum | FL, USA | — | MG754770 | — | MG754874 |
UMNFL100 | Ganoderma cf. weberianum | FL, USA | MG654373 | MG754762 | MG754834 | — |
UMNFL32 | Ganoderma cf. weberianum | FL, USA | MG654372 | MG754761 | MG754833 | — |
123FL | Ganoderma zonatum | FL, USA | MG654416 | MG754774 | MG754841 | — |
179NC | Ganoderma zonatum | NC, USA | MG654417 | MG754775 | MG754842 | MG754875 |
FL-02 | Ganoderma zonatum | FL, USA | KJ143921 | KJ143941 | KJ143962 | KJ143979 |
GAN11 | Ganoderma zonatum | FL, USA | — | MG754776 | — | MG754876 |
UMNFL105 | Ganoderma zonatum | FL, USA | MG654408 | MG754780 | MG754847 | — |
UMNFL137 | Ganoderma zonatum | FL, USA | MG654413 | MG754781 | MG754848 | — |
UMNFL16 | Ganoderma zonatum | FL, USA | MG654381 | MG754777 | MG754843 | — |
UMNFL85 | Ganoderma zonatum | FL, USA | MG654402 | MG754778 | MG754844 | MG754877 |
UMNFL89 | Ganoderma zonatum | FL, USA | MG654403 | MG754779 | MG754845 | — |
UMNSC4 | Ganoderma zonatum | SC, USA | MG654415 | MG754782 | MG754849 | — |
TC-02 | Tomophagus colossus | Vietnam | KJ143923 | KJ143943 | KJ143963 | — |
UMNFL110 | Tomophagus colossus | FL, USA | MG654429 | MG754850 | — |
1. Accession numbers in boldface were generated from this study