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. 2018 Jul 18;8:10872. doi: 10.1038/s41598-018-28948-z

Table 2.

The descendant counts of GO terms at depth-01 are highly skewed.

D1 Alias dcnt depth GO name
29,625 D00 GO:0008150 biological_process
A 18,703 D01 GO:0009987 cellular process
B 13,064 D01 GO:0065007 biological regulation
C 9,805 D01 GO:0008152 metabolic process
D 7,544 D01 GO:0032501 multicellular organismal process
E 6,473 D01 GO:0032502 developmental process
F 6,004 D01 GO:0050896 response to stimulus
G 4,354 D01 GO:0051179 localization
H 3,572 D01 GO:0071840 cellular component organization or biogenesis
I 2,369 D01 GO:0051704 multi-organism process
J 2,310 D01 GO:0023052 signaling
K 1,796 D01 GO:0002376 immune system process
L 1,277 D01 GO:0000003 reproduction
M 1,219 D01 GO:0022414 reproductive process
N 843 D01 GO:0040011 locomotion
O 492 D01 GO:0008283 cell proliferation
P 432 D01 GO:0040007 growth
Q 350 D01 GO:0022610 biological adhesion
R 280 D01 GO:0007610 behavior
S 113 D01 GO:0001906 cell killing
T 72 D01 GO:0044848 biological phase

The root term, biological_process has over twenty GO children at depth-01 shown in the table sorted by their number of descendants (dcnt) with cellular process at the top having over 18,000 descendants and cell killing near the bottom having just over 100 descendants. The first column (D1 Alias) contains a letter used as an alias for each depth-01 GO term. The second column represents the total number of descendants from the specified GO term down to all of its leaf-level GO terms, which have no child GO terms. The third column, depth, shows the root term is at depth-00 and its children are at depth-01. The forth column, GO, is the ID for the term. The fifth column shows the human-readable name of the GO term. GO DAG relationships like part_of are used to count descendant counts in this table.