Table 3.

List of the Gene Ontology Categories for Biological Process with two or more Peptide Spectral Matches*.

GO Category	Biological Process
GO:0046034	ATP metabolic process
GO:0009058	biosynthetic process
GO:0005975	carbohydrate metabolic process
GO:0009056	catabolic process
GO:0006520	cellular amino acid metabolic process
GO:0016043	cellular component organization
GO:0006935	chemotaxis
GO:0051186	cofactor metabolic process
GO:0006259	DNA metabolic process
GO:0006091	generation of precursor metabolites and energy
GO:0006811	ion transport
GO:0006807	nitrogen compound metabolic process
GO:0071941	nitrogen cycle metabolic process
GO:0009117	nucleotide metabolic process
GO:0055114	oxidation-reduction process
GO:0016310	phosphorylation
GO:0019538	protein metabolic process
GO:0006950	response to stress
GO:0016070	RNA metabolic process
GO:0007165	signal transduction
GO:0044281	small molecule metabolic process
GO:0006790	sulfur compound metabolic process
GO:0006412	translation
GO:0006810	transport

*Complete list of Gene Ontology Categories is in Supplemental Table S5.

Bold text indicates Gene Ontology Categories identified in the NPap pool.