Table 2.

Summary of analysis of partial mtCOI sequences from GenBank against HTS-derived mitogenomes from this study. Numbers of haplotypes failing each criterion are shown in columns.

MED group	Total haplotypes	(i) INDEL	(ii) STOP	(iii) Polymorphisms	(iv) AA changea	Potential NUMTs
						Total	%
Q1b,c	212	67	0	25	47	116	54.7%
Q2b,c	37	9	0	4	10	20	54.1%
Q3c	2	0	0	0	1	1	50.0%
Q3b (=Q5c)	8	1	0	0	3	4	50.0%
ASLb (=Q4c)	33	7	0	0	10	17	51.5%

^aAA = amino acid. Only sequences without INDELs were analysed at the amino acid level. Only amino acid changes in sites conserved across all reference Bemisia species were considered.

^bNaming system of Gueguen et al.³⁸.

^cNaming system of Chu et al.³⁹.