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. 2018 Jul 17;92(15):e00265-18. doi: 10.1128/JVI.00265-18

FIG 4.

FIG 4

Detection of possible recombination by bootscan analysis. Bootscanning was conducted with Simplot version 3.5.1 (F84 model; window size, 1,000 bp; step, 200 bp). (A) Falcon CoV UAE-HKU27 (FalCoV UAE-HKU27) was used as the query sequence and compared with the genome sequences of white-eye coronavirus HKU16 (WECoV HKU16), magpie robin coronavirus HKU18 (MRCoV HKU18), and ThCoV HKU12 thrush coronavirus HKU12 (ThCoV HKU12). (B) Quail CoV UAE-HKU30 (QuaCoV UAE-HKU30) was used as the query sequence and compared with the genome sequences of sparrow coronavirus HKU17 (SpCoV HKU17), munia coronavirus HKU13 (MunCoV HKU13), and ThCoV HKU12.