TABLE 4.
Putative cleavage sites at the junctions between nonstructural proteins in FalCoV UAE-HKU27, HouCoV UAE-HKU28, PiCoV UAE-HKU29, and QuaCoV UAE-HKU30 compared with those in other deltacoronaviruses
| nsp pair | Cleavage site in: |
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| PorCoV HKU15 | WECoV HKU16 | SpCoV HKU17 | MRCoV HKU18 | NHCoV HKU19 | WiCoV HKU20 | CMCoV HKU21 | FalCoV UAE-HKU27 | HouCoV UAE-HKU28 | PiCoV UAE-HKU29 | QuaCoV UAE-HKU30 | |
| nsp2/nsp3 | AG/SD | AG/SD | AG/SD | AG/AD | VG/GL | DG/VY | AG/VS | AG/SD | AG/SD | AG/SD | AG/SD |
| nsp3/nsp4 | AG/AP | AG/AR | AG/AP | AG/AM | TG/GN | GG/SK | AG/KF | AG/RK | AG/RK | AG/RK | AG/AP |
| nsp4/nsp5 | LQ/AG | LQ/AG | LQ/AG | LQ/AG | VQ/AG | VQ/SG | VQ/AG | LQ/AG | LQ/AG | LQ/AG | LQ/AG |
| nsp5/nsp6 | LQ/SG | LQ/SN | LQ/SG | LQ/SG | LQ/GT | LQ/AN | LQ/AS | LQ/SG | LQ/SG | LQ/SG | LQ/SG |
| nsp6/nsp7 | VQ/NK | VQ/NK | VQ/NK | VQ/NK | VQ/NK | VQ/NR | VQ/NR | VQ/NR | VQ/NR | VQ/NR | VQ/NK |
| nsp7/nsp8 | VQ/AV | VQ/AV | VQ/AV | VQ/AV | LQ/VV | LQ/VV | LQ/VV | LQ/AV | LQ/AV | LQ/AV | VQ/AV |
| nsp8/nsp9 | LQ/NN | LQ/NN | LQ/NN | LQ/NN | LQ/NN | CQ/NN | LQ/NN | LQ/NN | LQ/NN | LQ/NN | LQ/NN |
| nsp9/nsp10 | LQ/AS | LQ/AN | LQ/AN | LQ/AN | LQ/SS | LQ/AN | LQ/AT | LQ/AN | LQ/AN | LQ/AN | LQ/AN |
| nsp10/nsp11 | LQ/NS | LQ/GS | LQ/NS | LQ/NS | LQ/LG | LQ/SN | LQ/NT | LQ/GS | LQ/GS | LQ/GS | LQ/NS |
| nsp12/nsp13 | LQ/AS | LQ/AS | LQ/AS | LQ/AS | LQ/AT | LQ/AT | LQ/AS | LQ/AS | LQ/AS | LQ/AS | LQ/AS |
| nsp13/nsp14 | LQ/SS | LQ/SS | LQ/SS | LQ/AG | VQ/SL | VQ/AE | VQ/CS | LQ/SS | LQ/SS | LQ/SS | LQ/SG |
| nsp14/nsp15 | LQ/NL | LQ/NL | LQ/NL | LQ/NL | LQ/TL | LQ/TL | LQ/TI | LQ/NL | LQ/NL | LQ/NL | LQ/NL |
| nsp15/nsp16 | LQ/SL | VQ/SL | LQ/SL | LQ/SL | VQ/AL | LQ/SL | VQ/SL | VQ/AL | VQ/AL | VQ/AL | LQ/SL |