FIG 3 .

Induction of EBV lytic transcripts in HK1-EBV ALI culture. (A) RNA-seq profile of EBV latent and lytic transcripts collected from HK1-EBV cells at week 0 to week 3 of ALI culture. FPKM, fragments per kilobase of transcript per million mappable reads. (B) FPKM values of differentially regulated EBV and host transcripts with ≥2-fold change in HK1-EBV cells between week 3 and week 0 of ALI culture. Sequence reads were aligned separately to the EBV genome or the human genome and represented as FPKM, which takes into account the total number of mapped reads, and the data can be compared between week 0 and week 3 but cannot be compared between EBV and host values.