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. Author manuscript; available in PMC: 2018 Jul 19.
Published in final edited form as: Free Radic Biol Med. 2018 Jan 31;119:93–107. doi: 10.1016/j.freeradbiomed.2018.01.018

Table 1.

Examples of clock- and clock-controlled genes with cyclic activity in the whole kidneys of rats and mice.

Mouse Kidney

Gene Description Period (hr) Time of Peaka (ZT) Time of Nadira (ZT)
Arntl Brain and muscle Arnt-like protein–1 (Bmal1) 24 ∼22.5 ∼10.5
Clock Circadian Locomotor Output Cycles Kaput (Clock) 24 ∼22 ∼10
Per1 Period 1 (Per1) 24 ∼11 ∼1.5
Per2 Period 2 (Per2) 24 ∼14 ∼2
Per3 Period 3 (Per3) 24 ∼11 ∼23
Cry1 Cryptochrome 1 (Cry1) 24 ∼18 ∼6
Cry2 Cryptochrome 2 (Cry2) 24 ∼14 ∼2
Nr1d1 Rev-ErbA Alpha (Rev-erbα) 24 ∼7 ∼21
Dbp D site albumin promoter binding protein 24 ∼10 ∼23
Slc9a3 Solute carrier family 9, member 3 (Na+/H+ exchanger 3; NHE3) 24 ∼9 ∼21
Avpr1a Arginine vasopressin receptor 1a (V1aR) 24 ∼22 ∼11
Avpr2 Arginine vasopressin receptor 2 (V2R) 28 ∼21 ∼6-9
Sgk1 Serum/glucorticord regulated kinase 1 24 ∼15.5 ∼3
Edn1 Endothelin–1 (ET–1) 26 ∼18 ∼6
Ednra Endothelin receptor subtype A 24 ∼20 ∼8
Ednrb Endothelin receptor subtype B 23 ∼7 ∼18
Cyba Cytochrome b–245, alpha polypeptide (p22phox) 32 ∼14 ∼0

Rat Kidney

Gene Description Period (hr) Time of Peak (ZT) Time of Nadira (ZT)

Arntl Brain and muscle Arnt-like protein–1 (Bmal1) 24 22:45 ∼11
Clock Circadian Locomotor Output Cycles Kaput (Clock) 24 23:21 ∼11
Per1 Period 1 (Per1) 24 13:11 ∼1
Per2 Period 2 (Per2) 24 14:24 ∼2
Cry1 Cryptochrome 1 (Cry1) 24 15:06 ∼3
Cry2 Cryptochrome 2 (Cry2) 24 17:53 ∼6
Scnn1a Epithelial sodium channel, alpha subunit (αENaC) 24 14:18 ∼2
Slc9a3 Solute carrier family 9, member 3 (Na+/H+ exchanger 3; NHE3) 24 14:05 ∼2
Slc12a3 Solute carrier family 12, member 3 (Na+-Cl- cotransporter; NCC) 24 13:53 ∼2
Avpr1a Arginine vasopressin receptor 1a (V1aR) 24 23:34 ∼11
Avpr2 Arginine vasopressin receptor 2 (V2R) 24 20:37 ∼8
a

Values are based on best estimates from available data. Further validation is needed. Gene data listed for mice was derived from CircaDB [37]. Gene data listed for rats was derived from Zhang et al. [26].