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. 2018 Jul 19;13(7):e0201069. doi: 10.1371/journal.pone.0201069

Table 2. Precision and repeatability of qPCR and ddPCR.

Normalized to
cel-miR-39
Normalized to
miR-16
Normalized to mean of
cel-miR-39 and miR-16
Mean CV (%) Mean CV (%) Mean CV (%)
miR-92a qPCR Precision 16.9 31.4 0.16 22.2 1.62 26.5
Repeatability 6.8 6.3 6.0
ddPCR Precision 5.8 26.7 0.22 21.6 1.13 23.7
Repeatability 13.2 4.4 7.8
miR-126 qPCR Precision 0.29 15.6 0.0028 10.5 0.028 11.1
Repeatability 5.1 4.8 4.2
ddPCR Precision 0.78 12.4 0.029 5.7 0.15 7.0
Repeatability 20.1 13.4 15.9
miR-16 qPCR Precision 107 13.2
Repeatability 5.2
ddPCR Precision 26.5 12.4
Repeatability 11.3

A microRNA pool was reverse transcribed in doublets in 15 independent cDNA syntheses on different days. The transcribed cDNAs were assessed in doublets in 15 independent qPCR and ddPCR. The 15 duplicate measurements were used to calculate the precision (inter-assay variation) and repeatability (intra-assay variation) of the two methods for microRNA quantification. The table shows for each method the mean of all 30 measurements and the coefficient of variation (CV).