Skip to main content
. 2018 Jul 19;8:10921. doi: 10.1038/s41598-018-29289-7

Table 1.

Summary of total sRNAs sequencing from six libraries.

Category CK1 T1 T2 T3 T4 CK2
Number Percent (%) Number Percent (%) Number Percent (%) Number Percent (%) Number Percent (%) Number Percent (%)
total_reads 21750527 21282022 19122236 26754613 24583971 19450616
high_quality 21199911 100 20547608 100 18447590 100 26043435 100 24024124 100 18984247 100
3′ adapter_null 480033 2.26 187212 0.91 168122 0.91 345399 1.33 212689 0.89 437851 2.31
insert_null 23640 0.11 6392 0.03 12199 0.07 20561 0.08 23047 0.10 38485 0.20
5′ adapter_contaminants 17532 0.08 15641 0.08 18995 0.10 51034 0.20 22246 0.09 44281 0.23
smaller_than_18nt 671781 3.17 863116 4.20 1711660 9.28 2173575 8.35 1269318 5.28 1061825 5.59
polyA 1733 0.01 995 0.00 825 0.00 1710 0.01 1321 0.01 468 0.00
expressed less than 5 7077285 33.38 7015148 34.14 4516006 24.48 4056791 15.58 3753104 15.62 2291039 12.07
clean_reads 12927907 60.98 12459104 60.64 12019783 65.16 19394365 74.47 18742399 78.01 15110298 79.59

Note: T1, T2, T3, and T4 indicated that after inoculation, red ripening fruits were chose and took at 48 h, 72 h, 96 h and 120 h, respectively. CK1 indicated that red ripening fruits were took from strawberry plants treated with sterile water. CK2 indicates B. cinerea. The same applies to the following figures and tables.