Table 5.

Details of Thrips tabaci novel miRNAs and its star strands obtained from this study. Information regarding mature, star and precursor sequences, start and end position, orientation, expression values, MFE value and (A+U) content, etc. have been given

MicroRNA Family	Name of the Novel miRNA	miRNA sequence	miRNA* sequence	Hairpin sequence	Start	End	Orientation	miRNA Reads	miRNA* Reads	MFE
Novel miRNA‐1	tta‐miR‐N1	AGGUAACUAACUUGCAGGCCA	NO	GUGGGAUGGCCAGUAAGUUAGAGCCCUCUUGUUUAGAUGAAGUUGGAGGUAACUAACUUGCAGGCCAAGCCAC	3630	3650	‐ [Negative strand]	28	Nil	−32.9
Novel miRNA‐2	tta‐miR‐N2	UUCGUUGUGCGGAAAAAUGGAU	NO	CGCCAGGACCACAUUUUUCUGCACGGAUGGACUGAGAUUGAUACGGUUCGUUGUGCGGAAAAAUGGAUUCUUGGCG	1439	1460	+ [Positive strand]	6	Nil	−40
Novel miRNA‐3	tta‐miR‐N3	AUCAGCGAGUUCUGGCACUAC	NO	GGGAGGGAUCAGCGAGUUCUGGCACUACGUGCAGAUUUGAGUGCGUGUGUCAGAACUAAUUGAACCCGCCC	11956	11976	+ [Positive strand]	15	Nil	−39.6
Novel miRNA‐4	tta‐miR‐N4	UGACUAGACUCUCACUCGUCU	NO	UCCCUCGGCGAGUGAGUUUCUGGCUCAUGUUGUCAGUUCAUGACUAGACUCUCACUCGUCUAGGGA	8647	8667	+ [Positive strand]	3414	Nil	−37.2
Novel miRNA‐5	tta‐miR‐N5	UGGUAACUAACUUGCGGGCCA	NO	GGUGGCUCGUAAGUUAAGUUCCCGCUGUGAUUUAAACUAGUGGUAACUAACUUGCGGGCCACU	13477	13497	‐ [Negative strand]	305	Nil	−35.1
Novel miRNA‐6	tta‐miR‐N6	UUUGUUCGCUCGGCUCGAUGUA	CCUCGAGCCUGGCGGACAGGU(5) CCUCGAGCCUGGCGGACAGGUU(9)	CCUAAUGCCUCGAGCCUGGCGGACAGGUUGUCCUGUUCGAGUAAUUUGUUCGCUCGGCUCGAUGUAUGAGG	1925	1946	+ [Positive strand]	528	14	−37.9
Novel miRNA‐7	tta‐miR‐N7	UCAGGUACCAGAAGUAGCGCG	GUGCUGCAUCCGGUGCUAGUG(1)	CUUGCCGGUGCUGCAUCCGGUGCUAGUGGCUGUGAUUUUAAACCAGUCAGGUACCAGAAGUAGCGCGCGGGGAG	12973	12993	‐ [Negative strand]	1978	1	−36
Novel miRNA‐8	tta‐miR‐N8	UCUUUGGUGAUUUGGCGGUAUG	AUAAAGCUAGAUUACCAAAGC(6) AUAAAGCUAGAUUACCAAAGCA(6)	UGUUGCUUCUUUGGUGAUUUGGCGGUAUGUAAUAAUUGAAAGGCCAUAAAGCUAGAUUACCAAAGCAGGGACA	14289	14310	+ [Positive strand]	22	12	−29.3
Novel miRNA‐9	tta‐miR‐N9	CGCGUCGGUGUGCGCAGAAGG	CCUGCCUGGAGCCGCCGACGG(3)	GUAGGGUCGCGUCGGUGUGCGCAGAAGGGUCUAUGUGUGGGCCUGCCUGGAGCCGCCGACGGCUGUGC	274	294	+ [Positive strand]	12	3	−34.8