Table 2.
Putative CK receptor genes in potato genomes and encoded proteins
| Receptor clade | Length of putative CK receptors of potato plants (aa) | SNP/SAP numbers in putative CK receptor genes/proteins of cv. Désirée vs var. Phureja | Numbers of Désirée cDNA clones | ||
|---|---|---|---|---|---|
| Phureja a | Désirée b | DNA bases | Amino acids | ||
| HK2 orthologs | StHK2: 1263 | StHK2a: 1263 StHK2b: 1263 |
5 SNPs 4 SNPs |
3 SAPs 2 SAPs |
17 17 |
| HK3 orthologs | StHK3: 1032 | StHK3a: 1032 StHK3b: 1031 |
No SNP 23 SNPs, 3 del |
No SAP 9 SAPs, 1 del |
6 3 |
| HK4 orthologs | StHK4: 992 | StHK4a: 992 StHK4b: 991 |
No SNP 28 SNPs, 3 del |
No SAP 12 SAPs, 1 del |
1 9 |
SNP, single nucleotide polymorphism; SAP, single aa polymorphism.
aDoubled monoploid, method: total genome sequencing.
bAutotetraploid, method: PCR with cDNA as a template.