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. 2018 Jun 20;28(8):624–636. doi: 10.1093/glycob/cwy051

Table III.

Internal loop disorder observed in wild-type GTB and Arg188 and Asp302 mutant structures. All residues in these internal loops lie in conformations corresponding to the “open” state described by Alfaro et al. (2008)

Enzyme Internal loop
175 180 185 190
GTBa VGayk rWQDV SMRRM EMISD
GTA/D302C VRayk rwqDV SMRRM EMISD
GTB/D302A VGayk rwqdv smrrm emisd
GTB/D302C Vgayk rwqdv smrrm emiSD
GTB/D302L Vgayk rwqdV SMRRM EMISD
GTB/R188K VGayk rwqdV SMRKM EMISD

aPDB code: 2RIT (Alfaro et al. 2008).

One-letter amino acid codes with upper case black letters correspond to unambiguous electron density for main chain and side chain atoms, blue corresponds to unambiguous electron density for main chain atoms only; red letters correspond to weak or ambiguous electron density for main chain and side chain atoms. Residues with one-letter amino acid codes in lower case have not been included in the refined models.