Table III.
Internal loop disorder observed in wild-type GTB and Arg188 and Asp302 mutant structures. All residues in these internal loops lie in conformations corresponding to the “open” state described by Alfaro et al. (2008)
Enzyme | Internal loop | |||
---|---|---|---|---|
175 | 180 | 185 | 190 | |
GTBa | VGayk | rWQDV | SMRRM | EMISD |
GTA/D302C | VRayk | rwqDV | SMRRM | EMISD |
GTB/D302A | VGayk | rwqdv | smrrm | emisd |
GTB/D302C | Vgayk | rwqdv | smrrm | emiSD |
GTB/D302L | Vgayk | rwqdV | SMRRM | EMISD |
GTB/R188K | VGayk | rwqdV | SMRKM | EMISD |
aPDB code: 2RIT (Alfaro et al. 2008).
One-letter amino acid codes with upper case black letters correspond to unambiguous electron density for main chain and side chain atoms, blue corresponds to unambiguous electron density for main chain atoms only; red letters correspond to weak or ambiguous electron density for main chain and side chain atoms. Residues with one-letter amino acid codes in lower case have not been included in the refined models.