Table 3.
The information of known miRNAs identified in CK and T48 libraries.
| Name of miRNAs | Read Counts | Length | Expression Normalization | Mature Sequence | ||
|---|---|---|---|---|---|---|
| T48 | CK | T48 | CK | |||
| bna-miR1140 | 3 | 7 | 21 | 2.69 | 3.46 | ACAGCCTAAACCAATCGGAGC |
| bna-miR156a | 25 | 19 | 21 | 22.41 | 9.40 | TGACAGAAGAGAGTGAGCACA |
| bna-miR156b | 55 | 48 | 21 | 49.29 | 23.74 | TTGACAGAAGATAGAGAGCAC |
| bna-miR156c | 55 | 48 | 21 | 49.29 | 23.74 | TTGACAGAAGATAGAGAGCAC |
| bna-miR156d | 21 | 17 | 20 | 18.82 | 8.41 | TGACAGAAGAGAGTGAGCAC |
| bna-miR156e | 21 | 17 | 20 | 18.82 | 8.41 | TGACAGAAGAGAGTGAGCAC |
| bna-miR156f | 21 | 17 | 20 | 18.82 | 8.41 | TGACAGAAGAGAGTGAGCAC |
| bna-miR156g | 55 | 48 | 21 | 49.29 | 23.74 | TTGACAGAAGATAGAGAGCAC |
| bna-miR159 | 48352 | 71828 | 21 | 43334.40 | 35518.82 | TTTGGATTGAAGGGAGCTCTA |
| bna-miR160a | 42 | 116 | 21 | 37.64 | 57.36 | TGCCTGGCTCCCTGTATGCCA |
| bna-miR160b | 42 | 116 | 21 | 37.64 | 57.36 | TGCCTGGCTCCCTGTATGCCA |
| bna-miR160c | 42 | 116 | 21 | 37.64 | 57.36 | TGCCTGGCTCCCTGTATGCCA |
| bna-miR160d | 42 | 116 | 21 | 37.64 | 57.36 | TGCCTGGCTCCCTGTATGCCA |
| bna-miR161 | 7 | 10 | 21 | 6.27 | 4.94 | TCAATGCACTGAAAGTGACTA |
| bna-miR162a | 1 | 1 | 21 | 0.90 | 0.49 | TCGATAAACCTGTGCATCCAG |
| bna-miR164a | 1075 | 3252 | 21 | 963.44 | 1608.11 | TGGAGAAGCAGGGCACGTGCA |
| bna-miR164b | 235 | 744 | 21 | 210.61 | 367.91 | TGGAGAAGCAGGGCACGTGCG |
| bna-miR164c | 235 | 744 | 21 | 210.61 | 367.91 | TGGAGAAGCAGGGCACGTGCG |
| bna-miR164d | 235 | 744 | 21 | 210.61 | 367.91 | TGGAGAAGCAGGGCACGTGCG |
| bna-miR166a | 5126 | 10238 | 21 | 4594.06 | 5062.67 | TCGGACCAGGCTTCATTCCCC |
| bna-miR166b | 5126 | 10238 | 21 | 4594.06 | 5062.67 | TCGGACCAGGCTTCATTCCCC |
| bna-miR166c | 5126 | 10238 | 21 | 4594.06 | 5062.67 | TCGGACCAGGCTTCATTCCCC |
| bna-miR166d | 5126 | 10238 | 21 | 4594.06 | 5062.67 | TCGGACCAGGCTTCATTCCCC |
| bna-miR166e | 5126 | 10238 | 21 | 4594.06 | 5062.67 | TCGGACCAGGCTTCATTCCCC |
| bna-miR166f | 94 | 80 | 21 | 84.25 | 39.56 | TCGGACCAGGCTTCATCCCCC |
| bna-miR167a | 44 | 89 | 22 | 39.43 | 44.01 | TGAAGCTGCCAGCATGATCTAA |
| bna-miR167b | 44 | 89 | 22 | 39.43 | 44.01 | TGAAGCTGCCAGCATGATCTAA |
| bna-miR167c | 43 | 89 | 21 | 38.54 | 44.01 | TGAAGCTGCCAGCATGATCTA |
| bna-miR167d | 30 | 77 | 20 | 26.89 | 38.08 | TGAAGCTGCCAGCATGATCT |
| bna-miR168a | 1088 | 1681 | 21 | 975.10 | 831.25 | TCGCTTGGTGCAGGTCGGGAA |
| bna-miR168b | 0 | 3 | 21 | 0.00 | 1.48 | TCGCTTGGTGCAGGTCGAGAA |
| bna-miR169a | 0 | 1 | 21 | 0.00 | 0.49 | CAGCCAAGGATGACTTGCCGA |
| bna-miR169b | 0 | 1 | 21 | 0.00 | 0.49 | CAGCCAAGGATGACTTGCCGA |
| bna-miR169m | 24 | 83 | 21 | 21.51 | 41.04 | TGAGCCAAAGATGACTTGCCG |
| bna-miR169n | 10 | 6 | 21 | 8.96 | 2.97 | CAGCCAAGGATGACTTGCCGG |
| bna-miR171a | 3 | 17 | 21 | 2.69 | 8.41 | TTGAGCCGTGCCAATATCACG |
| bna-miR171b | 3 | 17 | 21 | 2.69 | 8.41 | TTGAGCCGTGCCAATATCACG |
| bna-miR171c | 3 | 17 | 21 | 2.69 | 8.41 | TTGAGCCGTGCCAATATCACG |
| bna-miR171d | 3 | 17 | 21 | 2.69 | 8.41 | TTGAGCCGTGCCAATATCACG |
| bna-miR171e | 3 | 17 | 21 | 2.69 | 8.41 | TTGAGCCGTGCCAATATCACG |
| bna-miR171f | 5 | 4 | 21 | 4.48 | 1.98 | TGATTGAGCCGCGCCAATATC |
| bna-miR171g | 5 | 4 | 22 | 4.48 | 1.98 | TGATTGAGCCGCGCCAATATCT |
| bna-miR172a | 1024 | 2651 | 21 | 917.74 | 1310.91 | AGAATCTTGATGATGCTGCAT |
| bna-miR172b | 78 | 204 | 21 | 69.91 | 100.88 | GGAATCTTGATGATGCTGCAT |
| bna-miR172c | 78 | 204 | 21 | 69.91 | 100.88 | GGAATCTTGATGATGCTGCAT |
| bna-miR172d | 290 | 836 | 21 | 259.91 | 413.40 | AGAATCTTGATGATGCTGCAG |
| bna-miR2111a-3p | 0 | 1 | 21 | 0.00 | 0.49 | GTCCTCGGGATGCGGATTACC |
| bna-miR2111a-5p | 3 | 3 | 21 | 2.69 | 1.48 | TAATCTGCATCCTGAGGTTTA |
| bna-miR2111b-3p | 2 | 9 | 21 | 1.79 | 4.45 | ATCCTCGGGATACAGATTACC |
| bna-miR2111b-5p | 3 | 3 | 21 | 2.69 | 1.48 | TAATCTGCATCCTGAGGTTTA |
| bna-miR2111d | 3 | 3 | 21 | 2.69 | 1.48 | TAATCTGCATCCTGAGGTTTA |
| bna-miR390a | 202 | 328 | 21 | 181.04 | 162.20 | AAGCTCAGGAGGGATAGCGCC |
| bna-miR390b | 202 | 328 | 21 | 181.04 | 162.20 | AAGCTCAGGAGGGATAGCGCC |
| bna-miR390c | 202 | 328 | 21 | 181.04 | 162.20 | AAGCTCAGGAGGGATAGCGCC |
| bna-miR393 | 1 | 6 | 21 | 0.90 | 2.97 | TCCAAAGGGATCGCATTGATC |
| bna-miR394a | 935 | 1948 | 20 | 837.97 | 963.28 | TTGGCATTCTGTCCACCTCC |
| bna-miR394b | 935 | 1948 | 20 | 837.97 | 963.28 | TTGGCATTCTGTCCACCTCC |
| bna-miR395a | 4 | 17 | 21 | 3.58 | 8.41 | CTGAAGTGTTTGGGGGAACTC |
| bna-miR395b | 4 | 17 | 21 | 3.58 | 8.41 | CTGAAGTGTTTGGGGGAACTC |
| bna-miR395c | 4 | 17 | 21 | 3.58 | 8.41 | CTGAAGTGTTTGGGGGAACTC |
| bna-miR395d | 5 | 9 | 21 | 4.48 | 4.45 | CTGAAGTGTTTGGGGGGACTC |
| bna-miR395e | 5 | 9 | 21 | 4.48 | 4.45 | CTGAAGTGTTTGGGGGGACTC |
| bna-miR395f | 5 | 9 | 21 | 4.48 | 4.45 | CTGAAGTGTTTGGGGGGACTC |
| bna-miR396a | 1193 | 2099 | 21 | 1069.20 | 1037.95 | TTCCACAGCTTTCTTGAACTT |
| bna-miR397a | 0 | 5 | 22 | 0.00 | 2.47 | TCATTGAGTGCAGCGTTGATGT |
| bna-miR397b | 0 | 5 | 22 | 0.00 | 2.47 | TCATTGAGTGCAGCGTTGATGT |
| bna-miR399a | 0 | 1 | 21 | 0.00 | 0.49 | TGCCAAAGGAGATTTGCCCGG |
| bna-miR399b | 0 | 1 | 21 | 0.00 | 0.49 | TGCCAAAGGAGATTTGCCCGG |
| bna-miR403 | 3727 | 5914 | 21 | 3340.24 | 2924.46 | TTAGATTCACGCACAAACTCG |
| bna-miR6028 | 0 | 17 | 21 | 0.00 | 8.41 | TGGAGAGTAAGGACATTCAGA |
| bna-miR6029 | 295 | 396 | 21 | 264.39 | 195.82 | TGGGGTTGTGATTTCAGGCTT |
| bna-miR6030 | 145 | 159 | 22 | 129.95 | 78.63 | TCCACCCATACCATACAGACCC |
| bna-miR6031 | 27 | 61 | 24 | 24.20 | 30.16 | AAGAGGTTCGGAGCGGTTTGAAGC |
| bna-miR6035 | 3 | 4 | 21 | 2.69 | 1.98 | TGGAGTAGAAAATGCAGTCGT |
| bna-miR6036 | 1 | 0 | 24 | 0.90 | 0.00 | ATAGTACTAGTACTTGCATGATCA |
| bna-miR824 | 270 | 196 | 21 | 241.98 | 96.92 | TAGACCATTTGTGAGAAGGGA |
| bna-miR860 | 7 | 2 | 21 | 6.27 | 0.99 | TCAATACATTGGACTACATAT |