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Yield of RNA-Seq reads from four species of anaerobic rumen fungi after cleaning and assembly.
| Species | Reads | After trimming (%) | After rRNA removal (%) | Mapped to polished contigs (%) | Mapped to final transcriptome (%) |
|---|---|---|---|---|---|
| Anaeromyces mucronatus | 538,784,287 | 94.0 | 92.8 | 92.4 | 90.1 |
| Neocallimastix frontalis | 298,777,750 | 99.7 | 89.4 | 86.5 | 85.5 |
| Orpinomyces joyonii | 298,232,228 | 99.6 | 97.4 | 97.2 | 94.4 |
| Piromyces rhizinflata | 561,826,160 | 93.5 | 91.3 | 91.0 | 87.9 |
