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. 2018 Jul 16;6(7):e01165. doi: 10.1002/aps3.1165

Table 1.

Exome capture data summary for the Lens samples used in the study

Gene pool Species Samplea Plex Total reads Aligned reads (%) Single alignment (%) Multiple alignment (%) Uniquely mapped (%) Multi mapped (%)
L. culinaris CDC Redberry 1 12 13,567,183 95.07 32.29 62.78 67.92 27.15
L. culinaris Indianhead 1 12 16,851,211 96.61 35.30 61.31 68.18 28.43
L. culinaris PI 178952 2 12 15,522,254 96.96 43.80 53.16 67.97 28.30
L. culinaris PI 299165 2 12 20,753,869 97.37 43.52 53.84 68.64 28.73
L. culinaris PI 468901 2 12 15,849,844 97.62 45.35 52.28 70.30 27.32
L. culinaris Shasta 1 12 12,691,222 95.01 28.87 66.15 63.05 31.96
L. orientalis BGE 016880 3 12 12,717,811 85.40 30.06 55.34 55.51 29.89
L. orientalis IG 72534 4 12 17,345,990 95.83 37.89 57.94 62.62 33.21
L. orientalis IG 72611 4 12 15,505,204 95.08 37.56 57.52 61.39 33.69
L. tomentosus IG 72614 4 12 21,754,287 93.55 35.87 57.68 56.73 36.83
L. tomentosus IG 72805 4 12 19,156,322 93.40 36.07 57.33 56.84 36.56
L. odemensis IG 72623 4 12 18,055,204 92.10 36.36 55.74 53.68 38.42
L. odemensis IG 72760 4 12 11,558,633 91.37 36.80 54.57 53.44 37.93
L. lamottei IG 110810 4 12 14,957,568 92.17 39.07 53.11 55.61 36.56
L. lamottei IG 110813 4 12 12,250,277 91.98 39.88 52.10 55.76 36.22
L. lamottei IG 72552 4 12 13,215,242 92.03 40.68 51.34 56.33 35.69
L. lamottei ILWL 29 4 12 14,065,720 88.78 30.81 57.97 50.08 38.70
L. ervoides IG 136620 4 12 14,905,955 92.13 38.64 53.48 54.54 37.59
L. ervoides IG 72815 4 12 17,179,746 91.92 38.24 53.68 54.17 37.75
L. ervoides L01‐827A 1 12 11,778,036 86.38 32.17 54.21 49.64 36.74
L. culinaris CN 105895 5 6 62,071,291 96.11 38.09 58.01 60.34 35.77
L. culinaris IG 1959 4 6 43,151,121 96.35 37.69 58.66 60.39 35.96
L. culinaris ILL 213 6 37,185,226 96.70 38.26 58.44 60.44 36.27
L. culinaris ILL 2507 4 6 42,707,717 96.58 36.09 60.50 59.58 37.00
L. culinaris ILL 4609 4 6 21,980,355 96.43 35.63 60.80 59.28 37.15
L. culinaris ILL 5722 4 6 41,432,535 97.39 38.51 58.88 62.72 34.66
L. culinaris ILL 7663 4 6 34,608,074 96.61 36.00 60.61 60.47 36.14
L. culinaris ILL 8007 4 6 27,894,290 96.66 36.74 59.92 59.58 37.08
L. culinaris ILL 9 4 6 57,429,161 96.93 38.53 58.40 61.79 35.15
L. culinaris PI 209858 2 6 69,589,951 96.53 35.95 60.58 59.95 36.58
L. culinaris PI 297285 LSP 2 6 41,070,927 97.06 37.30 59.76 63.03 34.03
L. culinaris PI 370481 LSP 2 6 52,612,438 96.89 36.39 60.50 61.13 35.75
L. culinaris PI 374118 2 6 34,753,926 96.82 36.48 60.33 60.92 35.89
L. culinaris PI 431710 2 6 38,337,889 96.37 36.24 60.13 59.41 36.97
L. culinaris PI 432245 LSP 2 6 33,097,715 97.02 37.26 59.77 61.90 35.12
L. culinaris PI 533693 LSP 2 6 47,350,007 97.42 35.42 62.00 61.92 35.50
L. nigricans IG 72539 4 6 19,064,179 73.95 28.42 45.53 41.34 32.62
L. nigricans IG 72541 4 6 12,618,403 69.80 24.87 44.94 37.67 32.14
a

Seed sources: 1 = Crop Development Centre, University of Saskatchewan, Saskatoon, Saskatchewan, Canada; 2 = USDA‐ARS Western Plant Introduction Station, Pullman, Washington, USA; 3 = Universidad de León, León, Spain; 4 = International Centre for Agricultural Research in the Dry Areas (ICARDA), Rabat, Morocco; 5 = Plant Gene Resources of Canada (PGRC), Saskatoon, Saskatchewan, Canada.