Figure EV4. Comparison of statistics obtained by standard differential expression (limma) and CNV approach applied to the same dataset.

• A–C
  Scatter plots of q‐values (−log₁₀‐transformed) associated to limma protein fold changes (x‐axis) and CNV values (y‐axis) for (A) lung vs. liver cells (Geiger et al, 2013), (B) hepatocytes vs. Kupffer cells (Azimifar et al, 2014), and (C) healthy kidney vs. renal carcinoma cells (Guo et al, 2015). Pearson's correlations are reported inside the plots. Related to Fig 2F and H and Datasets EV1, EV2 and EV3.