Table 3.
Novel peptides identified in mouse lens through integration of OMIC (Transcriptome and Proteome) datasets22,24.
| No. | Novel Peptide | Amino Acid Length | Number of PSMs | Novel Transcript ID | Genomic Coordinates (mm10) |
|---|---|---|---|---|---|
| 1 | AAESDLSTARPAPPEPR | 17 | 1 | MSTRG.4120.3 | Chr11: 117620218–117620288 |
| 2 | AFAHAEPR | 8 | 2 | MSTRG.6156.3 | Chr13: 120244503–120244596 |
| 3 | ATEDCFQER | 9 | 2 | MSTRG.5109.18 | Chr12: 113023646–113023713 |
| 4 | AVGVDCSAPEPR | 12 | 2 | MSTRG.3713.5 | Chr11: 97361423–97363714 |
| 5 | DLGGVESASPSAAR | 14 | 1 | MSTRG.19717.4 | Chr7: 137903048–137903154 |
| 6 | DREIWLNR | 8 | 4 | MSTRG.12904.4 | Chr2: 177493993–177494080 |
| 7 | GLQRPDGGDHR | 11 | 2 | MSTRG.398.2 | Chr1: 65973222–65973464 |
| 8 | LCGACGTASGTK | 12 | 3 | MSTRG.16432.2 | Chr5: 112688277–112688395 |
| 9 | LRHLNNVNILK | 11 | 2 | MSTRG.11709.1 | Chr2: 38729037–38735032 |
| 10 | NYFYTGAEIK | 10 | 1 | MSTRG.19785.1 | Chr7: 146523115–146545389 |
| 11 | QGISSISTFK | 10 | 3 | MSTRG.18410.1 | Chr7: 19857400–19857609 |
| 12 | SAQALVK | 7 | 2 | MSTRG.6483.20 | Chr14: 48326083–48326173 |
| 13 | SINEVIK | 7 | 1 | MSTRG.5839.2 | Chr13: 74088982–74089093 |
| 14 | SMGEDTVPK | 9 | 1 | MSTRG.6973.3 | Chr14: 121639196–121639264 |
| 15 | WLIEISK | 7 | 3 | MSTRG.8658.5 | Chr17: 3516990–3517538 |
| 16 | FLTVSTSPGFPGT | 13 | 1 | MSTRG.16436.1 | Chr5: 112684967–112698364 |
| 17 | AAGDAEPEDQAQPQPQPEPEPR | 22 | 4 | MSTRG.5528.4 | Chr13: 46517220–46517274 |
| 18 | LGHVGGADGANPSSAGSPQDGR | 22 | 1 | MSTRG.3412.1 | Chr11: 77839387–77839530 |
| 19 | SPGSEPQTQEAQEAGSDPQAARPQR | 25 | 2 | MSTRG.18532.2 | Chr7: 28289684–28289782 |
| 20 | ERPTPDVGDGQGPQLSESSSSPFSIPPDK | 29 | 11 | MSTRG.12232.3 | Chr2: 120330209–120330655 |
All 20 peptides were validated through matching MS/MS spectra of synthetic peptides. Note: PSMs: Peptide Spectrum Matches.