Table 1.
Genome | GI Classification | GI ID | Number ORFs | Size (kb) | Initial position (bp) | Final position (bp) | %GC | %Genome covered |
---|---|---|---|---|---|---|---|---|
M8 M(1999) | fGI | fGI1 (HRV1) | 127 | 151.71 | 249,507 | 401,287 | 61.3 | 3.96 |
fGI | fGI2 (HRV2) | 134 | 129.92 | 829,018 | 958,941 | 58.2 | 3.39 | |
fGI | fGI1 (HRV1) | 111 | 134.12 | 223,961 | 358,080 | 62.1 | 3.74 | |
M31 | fGI | fGI2 (HRV2) | 82 | 88.14 | 774,703 | 862,838 | 59.1 | 2.46 |
M(1999) | HGT-GI | GI3-M31 | 44 | 42.75 | 1,360,489 | 1,404,241 | 55.8 | 1.19 |
M1 M(1999) | fGI | fGI1 (HRV1) | 151 | 177.85 | 235,218 | 413,070 | 60.5 | 4.72 |
fGI | fGI2 (HRV2) | 44 | 51.25 | 841,588 | 892,833 | 62.2 | 1.36 | |
P13 SP(1999) | fGI | fGI1 (HRV1) | 139 | 140.56 | 246,865 | 387,420 | 61.9 | 3.90 |
fGI | fGI1 (HRV1) | 77 | 74.90 | 819,096 | 893,996 | 60.8 | 2.08 | |
HGT-GI | GI3-P13 | 30 | 27.30 | 2,335,400 | 2,362,700 | 50.6 | 0.76 | |
P18 | fGI | fGI1 (HRV1) | 87 | 109.18 | 237,245 | 346,422 | 62.7 | 2.92 |
SP(1999) | fGI | fGI2 (HRV2) | 50 | 56.79 | 793,772 | 850,557 | 62.4 | 1.59 |
HGT-GI | GI3-P18 | 18 | 33.80 | 1,990,500 | 2,024,300 | 58.7 | 0.90 | |
HGT-GI | GI4-P18 | 35 | 43.50 | 2,544,500 | 2,588,000 | 66.0 | 1.16 | |
HGT-GI | GI5-P18 | 105 | 114.61 | 2,608,780 | 2,723,390 | 61.4 | 3.06 | |
SP38 | fGI | fGI1 (HRV1) | 145 | 168.38 | 230,386 | 398,753 | 62.5 | 4.55 |
SP(2006) | fGI | fGI2 (HRV2) | 42 | 50.10 | 817,511 | 867,607 | 62.5 | 1.35 |
HGT-GI | GI3-SP38 | 26 | 23.80 | 3,584,200 | 3,560,400 | 51.0 | 0.64 | |
SP73 SP(2006) | fGI | fGI1 (HRV1) | 205 | 196.16 | 256,113 | 452,273 | 60.4 | 5.03 |
fGI | fGI2 (HRV2) | 103 | 104.73 | 872,601 | 977,331 | 58.6 | 2.69 | |
HGT-GI | GI3-SP73 | 106 | 113.67 | 2,993,000 | 3,106,670 | 61.4 | 2.91 | |
RM158 | fGI | fGI1 (HRV1) | 127 | 156.47 | 249,611 | 406,078 | 60.7 | 4.03 |
M(2006) | fGI | fGI2 (HRV2) | 97 | 94.72 | 840,001 | 934,723 | 58.7 | 2.44 |
HGT-GI | GI3-RM158 | 102 | 113.68 | 2,943,003 | 3,056,685 | 61.5 | 2.93 | |
HGT-GI | GI4-RM158 | 18 | 27.64 | 3,700,270 | 3,727,910 | 57.6 | 0.72 |