Skip to main content
. 2018 Jul 19;9:1499. doi: 10.3389/fmicb.2018.01499

Table 1.

Characteristics of the genomic islands found in the eight Salinibacter ruber strains compared in this study.

Genome GI Classification GI ID Number ORFs Size (kb) Initial position (bp) Final position (bp) %GC %Genome covered
M8 M(1999) fGI fGI1 (HRV1) 127 151.71 249,507 401,287 61.3 3.96
fGI fGI2 (HRV2) 134 129.92 829,018 958,941 58.2 3.39
fGI fGI1 (HRV1) 111 134.12 223,961 358,080 62.1 3.74
M31 fGI fGI2 (HRV2) 82 88.14 774,703 862,838 59.1 2.46
M(1999) HGT-GI GI3-M31 44 42.75 1,360,489 1,404,241 55.8 1.19
M1 M(1999) fGI fGI1 (HRV1) 151 177.85 235,218 413,070 60.5 4.72
fGI fGI2 (HRV2) 44 51.25 841,588 892,833 62.2 1.36
P13 SP(1999) fGI fGI1 (HRV1) 139 140.56 246,865 387,420 61.9 3.90
fGI fGI1 (HRV1) 77 74.90 819,096 893,996 60.8 2.08
HGT-GI GI3-P13 30 27.30 2,335,400 2,362,700 50.6 0.76
P18 fGI fGI1 (HRV1) 87 109.18 237,245 346,422 62.7 2.92
SP(1999) fGI fGI2 (HRV2) 50 56.79 793,772 850,557 62.4 1.59
HGT-GI GI3-P18 18 33.80 1,990,500 2,024,300 58.7 0.90
HGT-GI GI4-P18 35 43.50 2,544,500 2,588,000 66.0 1.16
HGT-GI GI5-P18 105 114.61 2,608,780 2,723,390 61.4 3.06
SP38 fGI fGI1 (HRV1) 145 168.38 230,386 398,753 62.5 4.55
SP(2006) fGI fGI2 (HRV2) 42 50.10 817,511 867,607 62.5 1.35
HGT-GI GI3-SP38 26 23.80 3,584,200 3,560,400 51.0 0.64
SP73 SP(2006) fGI fGI1 (HRV1) 205 196.16 256,113 452,273 60.4 5.03
fGI fGI2 (HRV2) 103 104.73 872,601 977,331 58.6 2.69
HGT-GI GI3-SP73 106 113.67 2,993,000 3,106,670 61.4 2.91
RM158 fGI fGI1 (HRV1) 127 156.47 249,611 406,078 60.7 4.03
M(2006) fGI fGI2 (HRV2) 97 94.72 840,001 934,723 58.7 2.44
HGT-GI GI3-RM158 102 113.68 2,943,003 3,056,685 61.5 2.93
HGT-GI GI4-RM158 18 27.64 3,700,270 3,727,910 57.6 0.72