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. 2018 Jun 29;46(13):6401–6415. doi: 10.1093/nar/gky529

Table 1.

X-ray diffraction and refinement statistics

Data collection a
Space group P43212
Cell constants
a = b, c (Å) 40.4, 284.6
α = β = γ (°) 90.0
Resolution (Å) 38.90–1.80
(1.83–1.80)
R p.i.m. (%)b 2.6 (45.1)
CC1/2 (%)c 98.7 (69.2)
I/σ(I) 19.9 (1.8)
Complete (%) 99.4 (91.8)
Redundancy 8.8 (7.9)
Refinement
Resolution (Å) 37.2–1.80
No. reflections 23 297
R work /R free (%) 18.9/22.1
No. atoms
Protein 746
RNA 572
Solvent 153
B -factors (Å 2 )
Protein 39
RNA 44
Waters 47
R.M.S. deviations
Bonds (Å) 0.005
Angles (°) 0.759
Clash scored 0.4
Ramachandran (%)
Allowed 100.0
Outliers 0.0
Coord. errore (Å) 0.21

a X-ray data collection (λ = 0.9795) was conducted remotely at beamline 12-2 of the Stanford Synchrotron Radiation Lightsource (SSRL, Menlo Park, CA, USA) using Blu-Ice software and the Stanford Auto-Mounter (50).

b R precision-indicating merging R-value = Inline graphic, where N is the redundancy of the data and Inline graphic is the average intensity (51). Data were reduced with XDS and AIMLESS (52,53).

c The Pearson correlation coefficient calculated for the average intensities resulting from division of the unmerged data into two parts, each containing half of the measurements selected at random for each unique reflection (54).

d Number of unfavorable all-atom steric overlaps ≥0.4 Å per 1000 atoms (55).

e Coordinate error as implemented in PHENIX (29).