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. 2016 Jan 11;5(2):583–593. doi: 10.1039/c5tx00305a

Table 1. Multi-parametric cellular phenotypic assay panel.

Assay and parameters Fluorescent probes
1. Cellular morphology and cytoskeletal assay
• Nuclear size and intensity • Hoechst 33342 a
• F-actin • Phalloidin (Alexa 488)
• α-Tubulin • α-Tubulin Ab (Alexa 546)
• Cell morphology • CellMask Deep Red
 
2. Cytotoxicity assay 1
• Cell count • Hoechst 33342
• MnSOD content • MnSODAb (Alexa 488)
• Mitochondrial membrane potential and mass (MMP) • MitoTracker Red CMXRos
• Nuclear membrane permeability (NMP) • TOTO-3
 
3. Oxidative stress assay
• Cell count • Hoechst 33342
• Reduced glutathione (GSH) • mBCI
• Reactive oxygen species (ROS) • CM-H2DCFDA
 
4. Cytotoxicity assay 2
• Cell count • Hoechst33342
• Autophagy • LC3B Ab (Alexa 488)
• Lysosome membrane potential and mass • LysoTracker Red
• Phosphohistone H2AX, Ser139 (DNA damage) • pH2AXAb (Alexa 647)
 
5. Apoptosis & necrosis assay
• Cell count • Hoechst 33342
• Early apoptosis • AnnexinV (Alexa 488)
• Late apoptosis • PI
• Necrosis
 
6. Cell cycle arrest assay
• Cell count • Hoechst 33342
• Cell cycle disruption

aThe colors of the probes represent the differential fluorescent colors of probes at the specified emission wavelength.