Table 7. Performance of top 5 ternary classification models of all fish for the external validation set.
Model a | AUC | CA | SE_0 b | SE_1 b | SE_2 b |
Pub_SVM | 0.85 | 0.67 | 0.67 | 0.67 | 0.68 |
Est_SVM | 0.84 | 0.66 | 0.61 | 0.70 | 0.62 |
KR_SVM | 0.84 | 0.65 | 0.62 | 0.70 | 0.60 |
Pub_KNN | 0.80 | 0.65 | 0.58 | 0.66 | 0.68 |
FP_SVM | 0.81 | 0.63 | 0.63 | 0.66 | 0.59 |
aAP2D: AP2D fingerprint, Est: estate fingerprint, Ext: extended fingerprint, FP: fingerprint, Graph: graphonly fingerprint, KR: Klekota-Roth fingerprint, Maccs: MACCS fingerprint, Pub: PubChem fingerprint, Sub: substructure fingerprint; ANN: artificial neural network, CT: classification tree, kNN: k-nearest neighbor, NB: naïve bayes, RF: random forest, SVM: support vector machine.
bSE_0: SE value of data labeled class 0, SE_1: SE value of data labeled class 1, SE_2: SE value of data labeled class 2.