Table 1. Next generation sequencing data from single whitefly transcriptomes of Bemisia tabaci populations collected in Brazil.
Sample ID | Species | Colony / Open Field | Reference | Number of Reads | Number of Reads After Trimming | CLC minimum contig length | Number of contigs | Contig average length |
---|---|---|---|---|---|---|---|---|
153_1 | MEAM1 | Colony | KU877168 | 36,449,340 | 36,449,269 | Trimmed reads | - | 143.9 |
500 | 25,640 | 1,240 | ||||||
1000 | 10,079 | 2,087 | ||||||
153_2 | MEAM1 | Colony | N/A | 44,093,422 | 41,041,633 | Trimmed reads | - | 146.0 |
500 | 31,072 | 1,228 | ||||||
154_1 | MED | Colony | JQ906700 | 37,206,396 | 37,206,313 | Trimmed reads | - | 144.7 |
1000 | 9,737 | 1,983 | ||||||
154_2 | MED | Colony | JQ906700 | 29,840,288 | 29,840,226 | Trimmed reads | - | 144.1 |
1000 | 7,730 | 1,947 | ||||||
320_1 | MED | Open Field | N/A | 64,080,188 | 57,947,512 | Trimmed reads | - | 145.5 |
500 | 41,165 | 1,240 | ||||||
320_3 | MED | Open Field | JQ906700 | 39,894,296 | 39,894,200 | Trimmed reads | - | 145.1 |
1000 | 9,719 | 1,969 | ||||||
156_2 | NW2 | Colony | AY521259 | 40,826,418 | 40,826,334 | Trimmed reads | - | 145.2 |
1000 | 11,961 | 2,232 | ||||||
156_3 | NW2 | Colony | AY521259 | 43,194,264 | 42,194,175 | Trimmed reads | - | 145.0 |
1000 | 12,802 | 2,244 | ||||||
156_4 | NW2 | Colony | N/A | 48,800,318 | 45,102,719 | Trimmed reads | - | 145.9 |
500 | 34,090 | 1,298 | ||||||
156_5 | NW2 | Colony | N/A | 24,568,460 | 22,491,230 | Trimmed reads | - | 145.7 |
500 | 21,597 | 1,310 |