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Genes differentially expressed at Q <0.05
| Source | Genes | Up* | Down* |
| S | 11,444 | 5,704 | 5,740 |
| E | 3,841 | 1,769 | 2,072 |
| a | 4,461 | 2,622 | 1,839 |
| b | 1,576 | 813 | 763 |
| S × E | 4,739 | 2,536 | 2,203 |
| S × a | 339 | 144 | 195 |
| S × b | 328 | 137 | 191 |
| E × a | 0 | — | — |
| E × b | 556 | 184 | 372 |
| a × b | 812 | 375 | 437 |
| S × E × a | 6 | 2 | 4 |
| S × E × b | 311 | 61 | 250 |
| S × a × b | 32 | 11 | 21 |
| E × a × b | 0 | — | — |
| S × E × a × b | 0 | — | — |
a, 2La; b, 2Rb; E, environment; S, sex.
In males vs. females; inverted vs. standard karyotypes; arid vs. benign conditions.
