Table 4.
Top 30 most significant cis eQTLs in endometrium.
| Probe ID | Gene Name | CHR | SNP | BP | A1 | BETA | SE | P | Distance (bp) |
|---|---|---|---|---|---|---|---|---|---|
| ILMN_1798177 | CHURC1 | 14 | rs10142379 | 65354946 | G | 1.269 | 0.04766 | 1.35E-70 | −46550 |
| ILMN_3271179 | RP11-82H13.2 | 14 | rs2766 | 24686145 | T | 1.873 | 0.07653 | 1.32E-64 | 26 |
| ILMN_1743145 | ERAP2 | 5 | rs2927608 | 96252432 | A | 1.831 | 0.07502 | 3.21E-63 | 3368 |
| ILMN_1695585 | RPS26 | 12 | rs1131017 | 56435929 | C | 0.6456 | 0.02778 | 4.86E-61 | −1280 |
| ILMN_1765332 | TIMM10 | 11 | rs2848626 | 57283988 | C | −0.8337 | 0.03686 | 3.29E-59 | −12029 |
| ILMN_1754501 | KIAA1841 | 2 | rs3213944 | 61372298 | G | 0.9616 | 0.044 | 6.04E-57 | −17967 |
| ILMN_2404850 | RPL14 | 3 | rs2276870 | 40499182 | C | 0.7358 | 0.03492 | 1.38E-54 | −4596 |
| ILMN_1753164 | IPO8 | 12 | rs10843810 | 30819597 | C | 0.6937 | 0.03305 | 2.37E-54 | 37338 |
| ILMN_3299955 | RPS26 | 12 | rs1131017 | 56435929 | C | 0.4524 | 0.02161 | 3.51E-54 | −406 |
| ILMN_2352023 | DSTYK | 1 | rs113817010 | 205104581 | A | −0.816 | 0.03981 | 7.68E-53 | −7169 |
| ILMN_3285153 | RPS26 | 12 | rs1131017 | 56435929 | C | 0.7216 | 0.03572 | 6.18E-52 | −1240 |
| ILMN_3236498 | PSMD5-AS1 | 9 | rs10818476 | 123572038 | A | 1.044 | 0.05423 | 1.06E-48 | −44172 |
| ILMN_2173294 | THNSL2 | 2 | rs6547752 | 88447437 | G | −1.054 | 0.05563 | 5.95E-48 | −38618 |
| ILMN_3242288 | RPS26 | 12 | rs1131017 | 56435929 | C | 0.6965 | 0.03717 | 2.19E-47 | −1252 |
| ILMN_2200659 | SNHG5 | 6 | rs1059307 | 86387888 | G | −0.6661 | 0.03645 | 6.31E-46 | −524 |
| ILMN_2198408 | MFF | 2 | rs58670479 | 228192473 | T | 1.255 | 0.06907 | 2.09E-45 | −29792 |
| ILMN_3235326 | SNHG17 | 20 | rs1739651 | 37048135 | A | 1.022 | 0.05669 | 3.91E-45 | −1360 |
| ILMN_2209027 | RPS26 | 12 | rs1131017 | 56435929 | C | 0.6352 | 0.03535 | 5.60E-45 | −298 |
| ILMN_1683279 | PEX6 | 6 | rs9471975 | 42919222 | T | −0.8114 | 0.0453 | 8.84E-45 | −12678 |
| ILMN_1805377 | POMZP3 | 7 | rs6979487 | 76131645 | A | 1.254 | 0.0715 | 1.28E-43 | −107658 |
| ILMN_1772459 | RPS23 | 5 | rs73138787 | 81568934 | A | −0.8894 | 0.05083 | 1.80E-43 | −355 |
| ILMN_2370872 | GRINA | 8 | rs56261297 | 145066853 | T | −0.3998 | 0.02353 | 7.39E-42 | −582 |
| ILMN_3209193 | RPS26 | 12 | rs11171739 | 56470625 | C | 0.5832 | 0.03437 | 8.71E-42 | 34410 |
| ILMN_3268403 | ZNF667-AS1 | 19 | rs35215648 | 56983716 | C | 0.7641 | 0.04529 | 1.78E-41 | −21847 |
| ILMN_1670841 | CPNE1 | 20 | rs200929686 | 34198350 | CA | −0.9118 | 0.05413 | 2.17E-41 | −15771 |
| ILMN_1719064 | KCTD10 | 12 | rs4766601 | 109890080 | C | 0.6889 | 0.04129 | 6.97E-41 | 3455 |
| ILMN_2327994 | AZIN1 | 8 | rs1991927 | 103858748 | T | −0.8619 | 0.05221 | 2.57E-40 | 19891 |
| ILMN_3298167 | ZSWIM7 | 17 | rs6416868 | 15924370 | A | −0.5671 | 0.03482 | 1.30E-39 | 44425 |
| ILMN_1653794 | SNHG5 | 6 | rs3087978 | 86388223 | C | −0.515 | 0.03173 | 2.00E-39 | 1042 |
| ILMN_2325028 | ODF2L | 1 | rs272489 | 86807618 | C | 0.885 | 0.0536 | 4.42E-39 | −12605 |