Table 5.
Top 30 most significant trans eQTLs in endometrium.
| SNP CHR | SNP | BP | Probe CHR | Probe ID | Gene Name | BETA | SE | P |
|---|---|---|---|---|---|---|---|---|
| 12 | rs1131017 | 56435929 | 19 | ILMN_3254492 | RPS26P55 | 0.84 | 0.03543 | 2.09E-62 |
| 12 | rs1131017 | 56435929 | 1 | ILMN_1726647 | RPS26P15 | 0.6449 | 0.02779 | 6.21E-61 |
| 12 | rs1131017 | 56435929 | 1 | ILMN_3248833 | RPS26P15 | 0.7986 | 0.03444 | 6.92E-61 |
| 12 | rs1131017 | 56435929 | 9 | ILMN_3290019 | RPS26P2 | 0.9057 | 0.03919 | 1.17E-60 |
| 12 | rs1131017 | 56435929 | X | ILMN_2180866 | RPS26P11 | 0.6742 | 0.02925 | 1.79E-60 |
| 12 | rs1131017 | 56435929 | 18 | ILMN_1737991 | RPS26P54 | 0.9733 | 0.04241 | 3.41E-60 |
| 12 | rs1131017 | 56435929 | 17 | ILMN_3296994 | RP11-713H12.2 | 0.8441 | 0.03695 | 7.03E-60 |
| 12 | rs1131017 | 56435929 | 7 | ILMN_1750636 | RPS26P47 | 0.7471 | 0.03279 | 1.05E-59 |
| 12 | rs1131017 | 56435929 | 13 | ILMN_2310703 | RPS26P47 | 0.7499 | 0.03301 | 1.69E-59 |
| 12 | rs1131017 | 56435929 | 1 | ILMN_3236675 | RPS26P13 | 0.8887 | 0.04185 | 4.42E-55 |
| 12 | rs1131017 | 56435929 | 8 | ILMN_1677697 | RPS26P35 | 0.7236 | 0.03543 | 1.30E-52 |
| 12 | rs1131017 | 56435929 | 8 | ILMN_1657950 | RP11-777J24.1 | 1.01 | 0.04977 | 3.79E-52 |
| 12 | rs1051470 | 118583232 | 2 | ILMN_3285785 | PEBP1P2 | −1.398 | 0.07031 | 6.02E-51 |
| 12 | rs1131017 | 56435929 | 10 | ILMN_3190596 | RP11-57C13.5 | 0.8352 | 0.04231 | 1.66E-50 |
| 12 | rs11171739 | 56470625 | 15 | ILMN_1678522 | RP11-330L19.1 | 0.6171 | 0.03342 | 1.60E-46 |
| 12 | rs1131017 | 56435929 | 18 | ILMN_3291511 | RPS26P54 | 0.7236 | 0.04157 | 3.51E-43 |
| 7 | rs7612 | 5567112 | 5 | ILMN_3235221 | CTC-512J14.7 | 1.422 | 0.0831 | 3.05E-42 |
| 12 | rs1131017 | 56435929 | 11 | ILMN_3308808 | MIR130A | 0.7658 | 0.05164 | 1.21E-34 |
| 6 | rs9483504 | 133135886 | 2 | ILMN_1679920 | LOC651894 | 0.5592 | 0.03816 | 2.39E-34 |
| 17 | rs222757 | 3569913 | 9 | ILMN_3260017 | HNRNPK | −0.7662 | 0.05317 | 1.80E-33 |
| 11 | rs866411223 | 810009 | 1 | ILMN_1723433 | FAM72B | −0.9104 | 0.07306 | 7.66E-27 |
| 7 | rs563273497 | 56107789 | 1 | ILMN_1704291 | CHCHD2P6 | −0.3612 | 0.03083 | 6.12E-25 |
| 4 | rs35057235 | 57261024 | 3 | ILMN_3236680 | PPATP1 | −0.3173 | 0.02889 | 1.22E-22 |
| 5 | rs62381648 | 170806428 | 12 | ILMN_1678775 | NPM1 | −0.1932 | 0.0187 | 1.24E-20 |
| 5 | rs73138787 | 81568934 | 1 | ILMN_1653039 | ANKRD65 | −0.3511 | 0.03412 | 1.62E-20 |
| 12 | rs11171739 | 56470625 | 3 | ILMN_3262348 | IP6K2 | 0.4107 | 0.04032 | 3.44E-20 |
| 2 | rs116743765 | 150935585 | 14 | ILMN_1715607 | CHMP4A | −0.6367 | 0.06515 | 5.95E-19 |
| 21 | rs4819003 | 46405793 | 18 | ILMN_3225894 | RP11-757O6.4 | −0.4413 | 0.04667 | 5.14E-18 |
| 18 | rs79045919 | 47697194 | 14 | ILMN_1758543 | CNIH | −1.312 | 0.1444 | 6.07E-17 |
| 17 | rs222851 | 7139238 | 3 | ILMN_3298824 | LOC728787 | 0.3601 | 0.0398 | 8.95E-17 |